CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, SxM, Stein2006
(Reference Set) 		Barley-Barley, Consensus 2006, Stein
Min.
Correspondences
Align Vertically
Stack
Maps Hv-SxM-Stein-4H Hv-Consensus2006-Stein-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, SxM, Stein2006 [ View Map Set Info ]
Map Name: Hv-SxM-Stein-4H
Map Start: 0.00
Map Stop: 129.75
Features by Type:
45 locus
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABC303-4H locus 52.48 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H ABC303-4H locus 44.02 () Automated name-based, Automated name-based View Maps
ABG319a-4H locus 84.32 No other positions
ABG319c-4H locus 113.99 No other positions
ABG397-4H locus 101.40 No other positions
ABG472-4H locus 81.35 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H ABG472-4H locus 84.61 () Automated name-based, Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H ABG472-4H locus 78.26 () Automated name-based, Automated name-based View Maps
ABG484-4H locus 56.50 No other positions
ABG500b-4H locus 97.33 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H ABG500b-4H locus 106.82 () Automated name-based, Automated name-based View Maps
bBE54a-4H locus 66.54 No other positions
BCD402b-4H locus 37.24 No other positions
BCD453b-4H locus 74.87 No other positions
BCD808b-4H locus 46.09 No other positions
Bmy1-4H locus 129.75 No other positions
JS103.3-4H locus 13.68 No other positions
MWG058-4H locus 58.63 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H MWG058-4H locus 61.76 () Automated name-based, Automated name-based View Maps
MWG077-4H locus 16.81 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H MWG077-4H locus 23.70 () Automated name-based, Automated name-based View Maps
MWG634-4H locus 0.00 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H MWG634-4H locus 3.31 () Automated name-based, Automated name-based View Maps
MWG635a-4H locus 40.34 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H MWG635a-4H locus 44.17 () Automated name-based, Automated name-based View Maps
WG622-4H locus 0.89 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H WG622-4H locus 0.00 () Automated name-based, Automated name-based View Maps
GBR0195-4H locus 4.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBR0195-4H locus 6.80 () Automated name-based, Automated name-based View Maps
GBM1221-4H locus 12.83 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H GBM1221-4H locus 16.32 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1221-4H locus 16.10 () Automated name-based, Automated name-based View Maps
GBR0306-4H locus 29.10 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBR0306-4H locus 28.10 () Automated name-based, Automated name-based View Maps
GBS0456-4H locus 35.93 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0456-4H locus 33.80 () Automated name-based, Automated name-based View Maps
GBM1482-4H locus 37.54 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1482-4H locus 35.20 () Automated name-based, Automated name-based View Maps
GBR1546-4H locus 41.99 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBR1546-4H locus 39.40 () Automated name-based, Automated name-based View Maps
GBM1028-4H locus 53.30 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1028-4H locus 50.30 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.