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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley genes 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Genes2-5H
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Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley genes 2 [ View Map Set Info ]
Map Name: Hordeum-Genes2-5H
Map Start: -59.00
Map Stop: 104.00
Features by Type:
40 locus
40 Total

Map Features

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Items 1 to 25 of 40.       of 2 | Next
Barley - Barley genes 2 - Hordeum-Genes2-5H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
abo12 locus 104.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H abo12 locus 2.40 () Automated name-based, Automated name-based View Maps
ari-e locus 2.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ari-e locus 55.30 () Automated name-based, Automated name-based View Maps
blf1 locus 22.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H blf1 locus 42.20 () Automated name-based, Automated name-based View Maps
cer-i locus -4.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cer-i locus 96.00 () Automated name-based, Automated name-based View Maps
cer-t locus -16.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cer-t locus 99.90 () Automated name-based, Automated name-based View Maps
cer-w locus -27.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cer-w locus 103.80 () Automated name-based, Automated name-based View Maps
cer-zj locus -5.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cer-zj locus 47.50 () Automated name-based, Automated name-based View Maps
cer-zp locus -7.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cer-zp locus 48.80 () Automated name-based, Automated name-based View Maps
com1 locus 3.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H com1 locus 54.00 () Automated name-based, Automated name-based View Maps
crm1 locus -28.00 No other positions
cud1 locus 43.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H cud1 locus 39.00 () Automated name-based, Automated name-based View Maps
ddt locus 66.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ddt locus 7.20 () Automated name-based, Automated name-based View Maps
Barley - Barley, VGxTP - Hordeum-Giese2-5H ddt locus 0.00 () Automated name-based, Automated name-based View Maps
dex1 locus 61.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H dex1 locus 14.30 () Automated name-based, Automated name-based View Maps
dsk locus -18.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H dsk locus 101.20 () Automated name-based, Automated name-based View Maps
ert-g locus 1.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ert-g locus 56.60 () Automated name-based, Automated name-based View Maps
ert-n locus 1.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ert-n locus 57.90 () Automated name-based, Automated name-based View Maps
fch6 locus 48.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H fch6 locus 27.50 () Automated name-based, Automated name-based View Maps
fst1 locus 27.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H fst1 locus 40.30 () Automated name-based, Automated name-based View Maps
glo-b locus 46.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H glo-b locus 31.90 () Automated name-based, Automated name-based View Maps
lax-a locus 5.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H lax-a locus 48.00 () Automated name-based, Automated name-based View Maps
lbi1 locus -47.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H lbi1 locus 137.90 () Automated name-based, Automated name-based View Maps
lys1 locus -11.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H lys1 locus 98.60 () Automated name-based, Automated name-based View Maps
lys3 locus 42.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H lys3 locus 38.40 () Automated name-based, Automated name-based View Maps
msg7 locus -36.00 Barley - Barley, BinMap 2005 - Hordeum-Bins-5H msg7 locus 124.90 () Automated name-based, Automated name-based View Maps
msg8 locus -39.00 No other positions

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