CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Durum wheat, Kofa x UC1113
(Reference Set) 		Wheat ABD-Wheat, Conan x Reeder
Min.
Correspondences
Align Vertically
Stack
Maps Kofa/UC1113-4A Conan/Reeder-4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Durum wheat, Kofa x UC1113 [ View Map Set Info ]
Map Name: Kofa/UC1113-4A
Map Start: 0.00
Map Stop: 129.80
Features by Type:
21 locus
1 qtl
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QSmc.ucw-4A qtl 122.60 - 128.60 No other positions
Xbarc52-4A locus 128.60 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xbarc52-4A locus 0.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc52-4A locus 96.90 () Automated name-based View Maps
Xpsr573-4A.2 locus 127.40 No other positions
Xwmc722-4A locus 127.40 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc722-4A locus 178.68 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc722-4A locus 83.90 () Automated name-based View Maps
Xpsr573-4A.1 locus 124.40 No other positions
Xbarc327-4A locus 122.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc327-4A locus 91.20 () Automated name-based View Maps
Xbarc343-4A locus 105.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc343-4A locus 52.80 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xbarc343-4A locus 17.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xbarc343-4A locus 147.65 () Automated name-based View Maps
Xbarc135-4A locus 99.30 No other positions
Xwmc718-4A locus 78.70 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc718-4A locus 106.22 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc718-4A locus 57.00 () Automated name-based View Maps
Xgwm265-4A locus 49.80 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm265-4A locus 25.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-4A Xgwm265-4A locus 92.40 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xgwm265-4A locus 63.90 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-4A Xgwm265-4A locus 42.90 () Automated name-based View Maps
Xbarc170-4A locus 46.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xbarc170-4A locus 0.63 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xbarc170-4A locus 26.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc170-4A locus 47.60 () Automated name-based View Maps
Xksm29-4A locus 44.20 No other positions
Xdupw4-4A locus 44.20 No other positions
Xwmc617-4A locus 28.10 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc617-4A locus 13.30 () Automated name-based View Maps
Lpx-A3 locus 18.30 No other positions
Xgwm192-4A locus 2.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm192-4A locus 3.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm192-4A locus 17.50 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm192-4A locus 34.30 () Automated name-based View Maps
Xgwm165-4A locus 0.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm165-4A locus 2.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4A Xgwm165-4A locus 12.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xgwm165-4A locus 19.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm165-4A locus 17.90 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm165-4A locus 34.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-4A Xgwm165-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xgwm165-4A locus -0.88 () Automated name-based View Maps
Xwmc258-4A locus 57.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwmc258-4A locus 67.50 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xwmc258-4A locus 67.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc258-4A locus 38.90 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc258-4A locus 91.00 () Automated name-based View Maps
Xwmc262-4A locus 103.10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4A Xwmc262-4A locus 108.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-4A Xwmc262-4A locus 120.30 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc262-4A locus 79.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc262-4A locus 60.90 () Automated name-based View Maps
Xbarc78-4A locus 121.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc78-4A locus 83.20 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xbarc78-4A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xbarc78-4A locus 44.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xbarc78-4A locus 0.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xbarc78-4A locus 70.90 () Automated name-based View Maps
Xwmc219-4A locus 126.20 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc219-4A locus 87.60 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4A Xwmc219-4A locus 29.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-4A Xwmc219-4A locus 160.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc219-4A locus 34.90 () Automated name-based View Maps
Xwmc313-4A locus 129.80 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc313-4A locus 29.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc313-4A locus 82.90 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xwmc313-4A locus 181.93 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.