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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO/QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO/Q-1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO/QTL [ View Map Set Info ]
Map Name: Oat-KxO/Q-1
Map Start: 0.00
Map Stop: 21.90
Features by Type:
3 locus
3 qtl
6 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
Oat - Oat, KxO/QTL - Oat-KxO/Q-1
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbcd1261A locus 21.20 Oat - Oat, KxO - Oat-KxO-1 Xbcd1261A locus 21.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Xbcd1261A locus 98.00 () Automated name-based, Automated name-based View Maps
Xcdo346B locus 13.00 Oat - Oat, KxO - Oat-KxO-1 Xcdo346B locus 13.00 () Automated name-based, Automated name-based View Maps
Xcdo393D locus 0.00 Oat - Oat, KxO - Oat-KxO-1 Xcdo393D locus 0.00 () Automated name-based, Automated name-based View Maps
Yield, KxO-1 qtl 18.90 - 21.90 No other positions
Straw yield, KxO-1 qtl 18.90 - 21.90 No other positions
BYDV, KxO-1 qtl 12.10 - 21.90 No other positions

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