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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oat-Oat, KxO/QTL
(Reference Set)
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Correspondences
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Maps Oat-KxO/Q-15
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO/QTL [ View Map Set Info ]
Map Name: Oat-KxO/Q-15
Map Start: -1.10
Map Stop: 64.90
Features by Type:
8 locus
6 qtl
14 Total

Map Features

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Items 1 to 14 of 14.
Oat - Oat, KxO/QTL - Oat-KxO/Q-15
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xumn128 locus 64.30 Oat - Oat, KxO - Oat-KxO-15 Xumn128 locus 64.30 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xumn128 locus 0.00 () Automated name-based, Automated name-based View Maps
Xcdo54 locus 60.40 Oat - Oat, KxO - Oat-KxO-15 Xcdo54 locus 60.40 () Automated name-based, Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-C Xcdo54 locus 37.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xcdo54 locus 4.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xcdo54 locus 74.00 () Automated name-based, Automated name-based View Maps
Xbcd127 locus 56.30 Oat - Oat, KxO - Oat-KxO-15 Xbcd127 locus 56.30 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xbcd127 locus 8.00 () Automated name-based, Automated name-based View Maps
Xbcd1380A locus 51.40 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xbcd1380A locus 25.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xbcd1380A locus 14.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xbcd1380A locus 51.40 () Automated name-based, Automated name-based View Maps
Xcdo1435C locus 39.90 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xcdo1435C locus 44.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xcdo1435C locus 39.90 () Automated name-based, Automated name-based View Maps
Xcdo460B locus 22.90 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xcdo460B locus 60.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xcdo460B locus 22.90 () Automated name-based, Automated name-based View Maps
Xcdo1403B locus 14.30 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xcdo1403B locus 68.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xcdo1403B locus 14.30 () Automated name-based, Automated name-based View Maps
Xcdo1345 locus 0.00 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 Xcdo1345 locus 80.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xcdo1345 locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xcdo1345 locus 64.00 () Automated name-based, Automated name-based View Maps
Yield, KxO-15-a qtl 61.70 - 64.90 No other positions
Yield, KxO-15-b qtl 61.70 - 64.90 No other positions
Groat percentage, KxO-15 qtl 50.80 - 64.90 No other positions
BYDV, KxO-15-a qtl -1.10 - 1.40 No other positions
BYDV, KxO-15-b qtl 52.90 - 56.40 No other positions
Height, KxO-15 qtl 38.10 - 40.60 No other positions

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