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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO-30
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO [ View Map Set Info ]
Map Name: Oat-KxO-30
Map Start: 0.00
Map Stop: 13.20
Features by Type:
12 locus
12 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Oat - Oat, KxO - Oat-KxO-30
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Px locus 6.30 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 Px locus 12.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-30 Px locus 6.30 () Automated name-based, Automated name-based View Maps
Xptb17 locus 0.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-30 Xptb17 locus 0.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 Xptb17 locus 16.00 () Automated name-based, Automated name-based View Maps
Xumn109 locus 9.70 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 Xumn109 locus 20.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-30 Xumn109 locus 9.70 () Automated name-based, Automated name-based View Maps
Xwg645 locus 2.90 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 Xwg645 locus 22.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-2H Xwg645 locus 120.60 () Automated name-based, Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-2 Xwg645 locus 117.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-2ABD Xwg645 locus 95.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-30 Xwg645 locus 2.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-2D Xwg645 locus 4.98 () Automated name-based, Automated name-based View Maps
Barley - Barley, BxGP - Hordeum-Laurie1-2H Xwg645 locus 166.60 () Automated name-based, Automated name-based View Maps
Barley - Barley, TxB - Hordeum-Laurie4-2H Xwg645 locus 82.80 () Automated name-based, Automated name-based View Maps
Barley - Barley, CxHs - Hordeum-Laurie2-2H Xwg645 locus 181.20 () Automated name-based, Automated name-based View Maps
Xumn407 locus 13.20 Oat - Oat, KxO/QTL - Oat-KxO/Q-30 Xumn407 locus 13.20 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 Xumn407 locus 22.00 () Automated name-based, Automated name-based View Maps
Xcdo1335 locus 2.90 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D Xcdo1335 locus -1.36 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5ABD Xcdo1335 locus -40.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xcdo1335 locus 17.00 () Automated name-based, Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xcdo1335 locus 55.30 () Automated name-based, Automated name-based View Maps
Xbcd1130 locus 2.90 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xbcd1130 locus 55.30 () Automated name-based, Automated name-based View Maps
Rye - Rye, ExR - Secale-ExR-5 Xbcd1130 locus 7.70 () Automated name-based, Automated name-based View Maps
Xbcd1850 locus 2.90 No other positions
Xbcd1851A locus 2.90 No other positions
Xcdo344 locus 2.90 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xcdo344 locus 55.30 () Automated name-based, Automated name-based View Maps
Xcdo938 locus 7.80 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4B Xcdo938 locus 23.00 () Automated name-based, Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xcdo938 locus 55.30 () Automated name-based, Automated name-based View Maps
Xumn207B locus 2.90 No other positions

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