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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO, AFLP
(Reference Set)
Min.
Correspondences
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Maps Oat-KxO/AFLP-16
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO, AFLP [ View Map Set Info ]
Map Name: Oat-KxO/AFLP-16
Map Start: 0.00
Map Stop: 82.00
Features by Type:
10 locus
10 Total

Map Features

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Items 1 to 10 of 10.
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-16
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
e1m3-12n locus 44.00 Oat - Oat, CxI - Oat-CxI-11 e1m3-12n locus 7.50 () Automated name-based, Automated name-based View Maps
e8m1-4 locus 48.00 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-13 e8m1-4 locus 49.00 () Automated name-based View Maps
Oat - Oat, CxI - Oat-CxI-11 e8m1-4 locus 13.50 () Automated name-based, Automated name-based View Maps
e4m6-2 locus 0.00 No other positions
Xcdo1092 locus 12.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xcdo1092 locus 50.80 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-16 Xcdo1092 locus 50.80 () Automated name-based, Automated name-based View Maps
Xbcd1117 locus 24.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xbcd1117 locus 42.20 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-16 Xbcd1117 locus 42.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xbcd1117 locus 71.00 () Automated name-based, Automated name-based View Maps
Xumn13 locus 36.00 Oat - Oat, KxO - Oat-KxO-16 Xumn13 locus 31.30 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xumn13 locus 31.30 () Automated name-based, Automated name-based View Maps
Xbcd1265 locus 60.00 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4B Xbcd1265 locus 32.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xbcd1265 locus 21.70 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-16 Xbcd1265 locus 21.70 () Automated name-based, Automated name-based View Maps
Xbcd1695 locus 74.00 Oat - Oat, KxO - Oat-KxO-16 Xbcd1695 locus 6.80 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xbcd1695 locus 6.80 () Automated name-based, Automated name-based View Maps
Xwg466 locus 78.00 Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xwg466 locus 3.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-7ABD Xwg466 locus 43.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-16 Xwg466 locus 3.50 () Automated name-based, Automated name-based View Maps
Xcdo1509C locus 82.00 Oat - Oat, KxO - Oat-KxO-16 Xcdo1509C locus 0.00 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-16 Xcdo1509C locus 0.00 () Automated name-based, Automated name-based View Maps

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