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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, OxT
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-OxT-24
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, OxT [ View Map Set Info ]
Map Name: Oat-OxT-24
Map Start: 0.00
Map Stop: 56.40
Features by Type:
10 locus
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Oat - Oat, OxT - Oat-OxT-24
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
CDO385 locus 30.00 Maize - Maize, TxCM - Zea-Ahn-2 CDO385 locus 148.05 () Automated name-based, Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-7 CDO385 locus 83.50 () Automated name-based, Automated name-based View Maps
bcd1829a locus 0.00 Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd1829a locus 24.10 () Automated name-based, Automated name-based View Maps
cdo405a locus 56.40 No other positions
isu84 locus 30.00 No other positions
psr112 locus 24.60 No other positions
psr953 locus 28.90 No other positions
rz143b locus 12.70 No other positions
e35m61-197.t locus 18.10 No other positions
e35m61-065.t locus 44.40 No other positions
e35m61-079.o locus 32.30 No other positions

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