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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, OxT
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-OxT-30
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, OxT [ View Map Set Info ]
Map Name: Oat-OxT-30
Map Start: 0.00
Map Stop: 47.70
Features by Type:
8 locus
8 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Oat - Oat, OxT - Oat-OxT-30
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
RZ446b locus 0.00 Maize - Maize, TxCM - Zea-Ahn-5 RZ446b locus 242.90 () Automated name-based, Automated name-based View Maps
bcd1840a locus 4.90 Oat - Oat, KxO, 2003 - Oat-KxO/2003-33 bcd1840a locus 2.49 () Automated name-based, Automated name-based View Maps
cdo516b locus 22.40 No other positions
cdo772 locus 37.40 Barley - Barley, GxH - Hordeum-GxH-6H cdo772 locus 81.36 () Automated name-based, Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-33 cdo772 locus 31.70 () Automated name-based, Automated name-based View Maps
isu136a locus 12.10 No other positions
psr371b locus 29.90 No other positions
rz404b locus 9.20 No other positions
rz476a locus 47.70 No other positions

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