CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Langdon x G18-16
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-LxG-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Langdon x G18-16 [ View Map Set Info ]
Map Name: Tt-LxG-5A
Map Start: 0.00
Map Stop: 144.00
Features by Type:
12 locus
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
305074 locus 0.00 No other positions
Xgwm154 locus 15.60 No other positions
Xgwm293 locus 32.60 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm293 locus 27.00 () Automated name-based, Automated name-based View Maps
405465 locus 39.20 No other positions
Xgwm156 locus 54.80 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm156 locus 51.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xgwm156 locus 40.00 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Xgwm156 locus 39.30 () Automated name-based View Maps
Xgwm186 locus 64.60 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm186 locus 53.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xgwm186 locus 95.60 () Automated name-based, Automated name-based View Maps
Xgwm1236 locus 72.20 No other positions
Xwmc415a locus 86.70 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5B Xwmc415a locus 65.50 () Automated name-based View Maps
406682 locus 91.90 No other positions
Xksum024 locus 105.30 No other positions
Xgwm126 locus 137.80 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm126 locus 97.00 () Automated name-based, Automated name-based View Maps
379033 locus 144.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.