CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Arina x Forno
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-AxF-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Arina x Forno [ View Map Set Info ]
Map Name: Triticum-AxF-6D
Map Start: 0.00
Map Stop: 120.00
Features by Type:
12 locus
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd49-6D locus 0.00 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xcfd49-6D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd49-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd49-6D locus 10.30 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xcfd49-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd49-6D locus -0.99 () Automated name-based, Automated name-based View Maps
Xgwm469-6D locus 35.50 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgwm469-6D locus -0.99 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6D Xgwm469-6D locus 33.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgwm469-6D locus 27.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm469-6D locus 21.10 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm469-6D locus 31.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm469-6D locus 25.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm469-6D locus 20.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm469-6D locus 13.80 () Automated name-based, Automated name-based View Maps
Centromere-6D locus 112.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Centromere-6D locus 69.00 - 72.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Centromere-6D locus 90.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-6D Centromere-6D locus 80.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Centromere-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-6D Centromere-6D locus 40.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Centromere-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Centromere-6D locus 108.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Centromere-6D locus 81.50 () Automated name-based, Automated name-based View Maps
Xgdm132-6D locus 30.80 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Xgdm132-6D locus 6.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgdm132-6D locus 19.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgdm132-6D locus 28.50 () Automated name-based View Maps
Xgdm108-6D locus 84.70 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Xgdm108-6D locus 50.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgdm108-6D locus -0.22 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgdm108-6D locus 62.80 () Automated name-based View Maps
Xgdm14-6D locus 108.40 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Xgdm14-6D locus 67.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Xgdm14-6D locus 71.50 () Automated name-based, Automated name-based View Maps
Xpsr915-6D locus 114.40 Wheat ABD - Wheat, Gale - Ta-Gale-6D Xpsr915-6D locus 6.20 () Automated name-based, Automated name-based View Maps
Xgwm55-6D locus 109.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xgwm55-6D locus 87.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xgwm55-6D locus 73.05 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xgwm55-6D locus 60.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-6D Xgwm55-6D locus 33.90 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6D Xgwm55-6D locus 108.40 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xgwm55-6D locus 27.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgwm55-6D locus 0.14 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xgwm55-6D locus 57.00 () Automated name-based, Automated name-based View Maps
Xcfd13-6D locus 41.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd13-6D locus 23.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd13-6D locus -0.99 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6D Xcfd13-6D locus 21.30 () Automated name-based, Automated name-based View Maps
Xcfd19-6D.2 locus 95.10 No other positions
Xcfd19-6D.1 locus 116.10 No other positions
Xcfd47-6D locus 120.00 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-6D Xcfd47-6D locus 50.80 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xcfd47-6D locus 0.38 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcfd47-6D locus 95.20 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.