CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat C-bands
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-Cyto-6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
chromband
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat C-bands [ View Map Set Info ]
Map Name: CS-Cyto-6B
Map Start: -5.90
Map Stop: 6.90
Features by Type:
30 chromband
30 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 30.       of 2 | Next
Wheat ABD - Wheat C-bands - CS-Cyto-6B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
6BSAT2.7 chromband -4.40 - -4.20 No other positions
6BSAT3.1 chromband -4.60 - -4.40 No other positions
6BSAT3.2 chromband -4.70 - -4.60 No other positions
6BSAT3.3 chromband -5.10 - -4.70 No other positions
6BSAT3.4 chromband -5.20 - -5.10 No other positions
6BSAT3.5 chromband -5.70 - -5.20 No other positions
6BSAT3.6 chromband -5.90 - -5.70 No other positions
6BS1.2 chromband -0.20 - 0.00 No other positions
6BS1.3 chromband -0.90 - -0.20 No other positions
6BS1.4 chromband -1.10 - -0.90 No other positions
6BS2.1 chromband -1.30 - -1.10 No other positions
6BS2.2 chromband -3.50 - -1.30 No other positions
6BS2.3 chromband -3.60 - -3.50 No other positions
6BS2.4 chromband -3.70 - -3.60 No other positions
6BS2.5 chromband -4.00 - -3.70 No other positions
6BL1.2 chromband 0.00 - 0.10 No other positions
6BL1.3 chromband 0.10 - 1.00 No other positions
6BL1.4 chromband 1.00 - 1.10 No other positions
6BL1.5 chromband 1.10 - 1.80 No other positions
6BL1.6 chromband 1.80 - 1.90 No other positions
6BL2.1 chromband 1.90 - 2.50 No other positions
6BL2.2 chromband 2.50 - 3.80 No other positions
6BL2.3 chromband 3.80 - 3.90 No other positions
6BL2.4 chromband 3.90 - 5.70 No other positions
6BL2.5 chromband 5.70 - 5.80 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.