CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Chinese Spring x SQ1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS/SQ1-6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Chinese Spring x SQ1 [ View Map Set Info ]
Map Name: CS/SQ1-6A
Map Start: 0.00
Map Stop: 192.00
Features by Type:
21 locus
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-6A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xm87p78.7-6A locus 0.00 No other positions
Xpsr899.1(Aba7)-6A locus 10.40 No other positions
Xgwm334-6A locus 14.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xgwm334-6A locus 8.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xgwm334-6A locus 1.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xgwm334-6A locus 6.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6A Xgwm334-6A locus 8.95 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xgwm334-6A locus -0.67 () Automated name-based, Automated name-based View Maps
Xpsr8Cxp3-6A locus 21.80 No other positions
Xpsr967.4-6A locus 24.50 No other positions
Xwmc398b-6A locus 30.80 No other positions
Xbarc3-6A locus 119.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc3-6A locus 47.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xbarc3-6A locus 91.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xbarc3-6A locus 43.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xbarc3-6A locus -0.67 () Automated name-based, Automated name-based View Maps
Xrsq805(Embp)-6A locus 121.60 Wheat ABD - Wheat, Gale - Ta-Gale-6A Xrsq805(Embp)-6A locus 3.90 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, durum x dicoccoid - Tturgidum-Du-6A Xrsq805(Embp)-6A locus 0.01 () Automated name-based, Automated name-based View Maps
Xm60p64.2-6A locus 121.60 No other positions
Xm85p65.3-6A locus 121.60 No other positions
Xbarc171-6A locus 121.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc171-6A locus 58.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xbarc171-6A locus 0.95 () Automated name-based, Automated name-based View Maps
Xpsp3029.1-6A locus 122.70 No other positions
Xpsp3071-6A locus 122.70 Wheat ABD - Wheat, Gale - Ta-Gale-6A Xpsp3071-6A locus 6.20 () Automated name-based, Automated name-based View Maps
Xwmc256-6A locus 131.90 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xwmc256-6A locus 0.73 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc256-6A locus 40.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-6A Xwmc256-6A locus 87.40 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xwmc256-6A locus 57.40 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xwmc256-6A locus 77.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6A Xwmc256-6A locus 89.90 () Automated name-based View Maps
Xcfa2164c-6A locus 131.90 No other positions
Xcsb112(Dhn5)-6A locus 144.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Xcsb112(Dhn5)-6A locus 43.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xcsb112(Dhn5)-6A locus 88.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, durum x dicoccoid - Tturgidum-Du-6A Xcsb112(Dhn5)-6A locus 33.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6A Xcsb112(Dhn5)-6A locus 111.50 () Automated name-based, Automated name-based View Maps
Xm62p64.12-6A locus 164.30 No other positions
Xwmc417-6A locus 165.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6A Xwmc417-6A locus 86.20 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xwmc417-6A locus 46.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-6A Xwmc417-6A locus 45.40 () Automated name-based View Maps
Xmtd12h-6A locus 183.00 No other positions
Xm77p64.4-6A locus 189.50 No other positions
Xbarc104-6A locus 192.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6A Xbarc104-6A locus 97.50 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-6A Xbarc104-6A locus 89.00 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-6A Xbarc104-6A locus 126.40 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.