CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Conan x Reeder
(Reference Set)
Wheat ABD-Wheat, Consensus SSR, 2004
Min.
Correspondences
Align Vertically
Stack
Maps Conan/Reeder-4A Ta-SSR-2004-4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Conan x Reeder [ View Map Set Info ]
Map Name: Conan/Reeder-4A
Map Start: 0.00
Map Stop: 184.31
Features by Type:
31 locus
1 qtl
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QCc.mst-4A qtl 86.60 - 114.70 No other positions
Xgwm350-4A locus 184.31 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4A Xgwm350-4A locus 32.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm350-4A locus 64.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm350-4A locus 113.50 () Automated name-based View Maps
XwPt4487-4A locus 181.93 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4A XwPt4487-4A locus 18.30 () Automated name-based View Maps
XwPt5489-4A locus 181.93 No other positions
XwPt3773-4A locus 181.93 No other positions
Xwmc722-4A locus 178.68 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc722-4A locus 83.90 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc722-4A locus 127.40 () Automated name-based View Maps
Xbarc343-4A locus 147.65 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc343-4A locus 52.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xbarc343-4A locus 105.40 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4A Xbarc343-4A locus 17.00 () Automated name-based View Maps
XwPt6214-4A locus 137.51 No other positions
XwPt5749-4A locus 137.51 No other positions
XwPt4645-4A locus 137.51 No other positions
XwPt7280-4A locus 137.51 No other positions
XwPt0105-4A locus 137.51 No other positions
XwPt9833-4A locus 137.51 No other positions
XwPt9196-4A locus 134.17 No other positions
XwPt4596-4A locus 133.56 No other positions
XwPt1743-4A locus 133.56 No other positions
XwPt0538-4A locus 133.56 No other positions
XwPt8275-4A locus 132.95 No other positions
Xbarc70-4A locus 129.43 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xbarc70-4A locus 70.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xbarc70-4A locus 111.90 () Automated name-based View Maps
Xwmc760-4A locus 114.74 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc760-4A locus 58.20 () Automated name-based View Maps
Xwmc718-4A locus 106.22 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc718-4A locus 78.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc718-4A locus 57.00 () Automated name-based View Maps
Xgwm494-4A locus 86.62 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-4A Xgwm494-4A locus -64.30 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-4A Xgwm494-4A locus 99.50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xgwm494-4A locus 49.10 () Automated name-based View Maps
Xwmc161-4A locus 79.82 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc161-4A locus 46.00 () Automated name-based View Maps
Xbarc1047-4A locus 73.02 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-4A Xbarc1047-4A locus 79.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_4A Xbarc1047-4A locus 0.73 () Automated name-based View Maps
Xwmc650-4A locus 43.29 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc650-4A locus 24.90 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.