CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-1A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-1A
Map Start: 0.00
Map Stop: 126.00
Features by Type:
45 locus
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc148-1A locus 56.80 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc148-1A locus 33.40 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xbarc148-1A locus 47.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc148-1A locus -0.23 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xbarc148-1A locus 47.80 () Automated name-based, Automated name-based View Maps
Xwmc278-1A locus 61.70 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc278-1A locus 61.60 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xwmc278-1A locus 53.30 () Automated name-based, Automated name-based View Maps
Xgwm99-1A locus 126.00 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xgwm99-1A locus 129.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm99-1A locus 153.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm99-1A locus 111.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm99-1A locus 139.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm99-1A locus 187.31 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1A Xgwm99-1A locus 107.70 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-1A Xgwm99-1A locus 120.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm99-1A locus 0.81 () Automated name-based, Automated name-based View Maps
Xwmc59-1A locus 98.00 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc59-1A locus 140.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xwmc59-1A locus 130.60 () Automated name-based, Automated name-based View Maps
Xgdm33-1A locus 6.10 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgdm33-1A locus -5.10 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgdm33-1A locus 42.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xgdm33-1A locus 1.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xgdm33-1A locus 0.00 () Automated name-based View Maps
Xbarc119-1A locus 53.60 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc119-1A locus 15.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc119-1A locus 12.30 () Automated name-based, Automated name-based View Maps
Xbarc17-1A locus 114.80 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc17-1A locus 155.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xbarc17-1A locus 153.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc17-1A locus 0.39 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc17-1A locus 140.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc17-1A locus 126.40 () Automated name-based, Automated name-based View Maps
Xgwm136-1A locus 11.60 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm136-1A locus 34.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1A Xgwm136-1A locus -58.60 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-1A Xgwm136-1A locus 29.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm136-1A locus 5.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm136-1A locus 5.20 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm136-1A locus 13.24 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm136-1A locus 173.20 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm136-1A locus 88.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm136-1A locus -0.66 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm136-1A locus 3.90 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm136-1A locus 53.60 () Automated name-based, Automated name-based View Maps
Xgwm164-1A locus 56.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm164-1A locus 46.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm164-1A locus 0.09 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm164-1A locus 42.90 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xgwm164-1A locus 63.70 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1A Xgwm164-1A locus -4.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm164-1A locus 40.50 () Automated name-based, Automated name-based View Maps
Xgwm357-1A locus 51.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm357-1A locus 48.20 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1A Xgwm357-1A locus 7.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm357-1A locus 53.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm357-1A locus 54.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm357-1A locus 0.39 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xgwm357-1A locus 54.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm357-1A locus 86.00 () Automated name-based View Maps
Xgwm497-1A locus 85.50 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm497-1A locus 81.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm497-1A locus 86.80 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm497-1A locus 118.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-1A Xgwm497-1A locus 113.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm497-1A locus 0.09 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1A Xgwm497-1A locus 78.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm497-1A locus 108.90 () Automated name-based, Automated name-based View Maps
Xgwm33-1A locus 27.40 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm33-1A locus 31.50 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm33-1A locus 47.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm33-1A locus 16.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm33-1A locus 16.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm33-1A locus 16.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm33-1A locus -0.93 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm33-1A locus 15.30 () Automated name-based, Automated name-based View Maps
Glu-A3 locus 0.00 Wheat ABD - Wheat genes - Triticum-Genes-1A Glu-A3 locus -59.40 () Automated name-based, Automated name-based View Maps
Lr10 locus 22.20 No other positions
Xgwm135-1A locus 60.70 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm135-1A locus 135.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm135-1A locus 57.45 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm135-1A locus 55.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm135-1A locus 0.39 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm135-1A locus 56.20 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm135-1A locus 76.40 () Automated name-based View Maps
Xbarc28-1A locus 58.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc28-1A locus -0.23 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xbarc28-1A locus 84.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc28-1A locus 46.60 () Automated name-based, Automated name-based View Maps
Xbarc158-1A locus 113.80 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc158-1A locus 129.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc158-1A locus 0.39 () Automated name-based, Automated name-based View Maps
Xwmc336-1A locus 35.20 No other positions
Xwmc95-1A locus 40.50 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xwmc95-1A locus 36.32 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc95-1A locus 23.80 () Automated name-based View Maps
Xgdm136-1A locus 43.00 No other positions
Xwmc24-1A locus 48.40 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc24-1A locus 39.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xwmc24-1A locus 35.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-1A Xwmc24-1A locus 38.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc24-1A locus 43.30 () Automated name-based View Maps
Xwmc744-1A locus 57.50 No other positions
Xcfd30-1A locus 57.70 No other positions
Xcfd59-1A locus 57.00 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xcfd59-1A locus 126.90 () Automated name-based, Automated name-based View Maps
Xwmc826-1A locus 62.60 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.