CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Courtot x Chinese Spring, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Courtot/CS-GPW-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Courtot x Chinese Spring, GPW [ View Map Set Info ]
Map Name: Ta-Courtot/CS-GPW-1B
Map Start: -12.60
Map Stop: 160.30
Features by Type:
51 locus
51 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 51.       of 3 | Next
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo393-1B locus 160.30 No other positions
Xfba34-1B.1 locus 158.60 No other positions
Xcfa2292-1B locus 155.40 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xcfa2292-1B locus 0.93 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xcfa2292-1B locus 177.00 () Automated name-based View Maps
Xgwm259-1B locus 144.70 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm259-1B locus 106.80 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1B Xgwm259-1B locus 115.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm259-1B locus 145.15 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1B Xgwm259-1B locus 191.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1B Xgwm259-1B locus 0.93 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xgwm259-1B locus 171.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm259-1B locus 142.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm259-1B locus 93.00 () Automated name-based View Maps
Xgpw3178-1B locus 138.10 No other positions
Xpsp3100-1B locus 136.40 Wheat ABD - Wheat, Gale - Ta-Gale-1B Xpsp3100-1B locus 60.20 () Automated name-based View Maps
Xfba309-1B locus 123.00 No other positions
Xfba178-1B locus 115.70 No other positions
Xfba34-1B.3 locus 105.20 No other positions
XE41M55c-1B locus 102.80 No other positions
XksuA1-1B locus 97.80 No other positions
Xfba34-1B.2 locus 95.60 No other positions
Xgwm274-1B locus 80.90 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Xgwm274-1B locus 111.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xgwm274-1B locus 56.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1B Xgwm274-1B locus 60.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xgwm274-1B locus 91.40 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-1B Xgwm274-1B locus 100.00 () Automated name-based View Maps
XE36M51a-1B locus 80.20 No other positions
Xwg822-1B locus 80.20 No other positions
Xglk163-1B locus 71.30 Wheat ABD - Wheat, Kyoto - Ta-Kyoto-1B Xglk163-1B locus 0.00 () Automated name-based View Maps
Xfba177-1B locus 69.00 No other positions
Xfbb255-1B locus 69.20 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xfbb255-1B locus 61.50 () Automated name-based View Maps
Xspa-1B locus 67.60 No other positions
Xcdo1188-1B locus 67.40 No other positions
Xgpw7371-1B locus 53.80 No other positions
Xfbb180-1B locus 53.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xfbb180-1B locus 45.60 () Automated name-based View Maps
Xglk136-1B locus 52.10 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B Xglk136-1B locus 44.10 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-1B Xglk136-1B locus 20.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xglk136-1B locus 44.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1B Xglk136-1B locus 42.60 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Xglk136-1B locus 56.80 () Automated name-based View Maps
Xglk431-1B locus 48.70 No other positions
Xfbb35-1B locus 48.70 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1B Xfbb35-1B locus 37.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-1B Xfbb35-1B locus 37.00 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.