CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Forno x Oberkulmer
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-FxO-2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Forno x Oberkulmer [ View Map Set Info ]
Map Name: Triticum-FxO-2D
Map Start: 0.00
Map Stop: 125.00
Features by Type:
14 locus
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-2D locus 90.00 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-2D Centromere-2D locus 126.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Centromere-2D locus 78.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Centromere-2D locus 94.20 - 98.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-2D Centromere-2D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2D Centromere-2D locus 146.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-2D Centromere-2D locus 102.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Centromere-2D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Centromere-2D locus 125.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Centromere-2D locus 85.00 () Automated name-based, Automated name-based View Maps
Xpsr566-2D locus 6.00 Wheat ABD - Wheat, Gale - Ta-Gale-2D Xpsr566-2D locus -60.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xpsr566-2D locus 0.00 () Automated name-based, Automated name-based View Maps
Xpsr649-2D locus 0.00 Wheat ABD - Wheat, Gale - Ta-Gale-2D Xpsr649-2D locus -63.30 () Automated name-based, Automated name-based View Maps
Xpsr933-2D locus 7.00 No other positions
Xpsr331-2D locus 125.00 Wheat ABD - Wheat, Gale - Ta-Gale-2D Xpsr331-2D locus 23.80 () Automated name-based, Automated name-based View Maps
Xpsr540-2D locus 121.00 Wheat ABD - Wheat, Gale - Ta-Gale-2D Xpsr540-2D locus 27.80 () Automated name-based, Automated name-based View Maps
Xpsr932-2D locus 121.00 Wheat ABD - Wheat, Gale - Ta-Gale-2D Xpsr932-2D locus 29.90 () Automated name-based, Automated name-based View Maps
Xglk529-2D locus 119.00 Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2D Xglk529-2D locus 53.00 () Automated name-based, Automated name-based View Maps
Xpsr335-2D locus 118.00 No other positions
Xglk653-2D locus 120.00 No other positions
Xglk632-2D locus 121.00 No other positions
Xglk664-2D locus 121.00 No other positions
Xpsr956-2D locus 121.00 No other positions
Xglk610-2D locus 122.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.