*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, R Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-RGenes-1A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, R Genes [ View Map Set Info ]
Map Name: Ta-Physical-RGenes-1A
Map Start: -100
Map Stop: 100
Features by Type:
10 breakpoint
11 breakpointinterval
15 locus
36 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 36.       of 2 | Next
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-1A locus 0 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-1A Centromere-1A locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A Centromere-1A locus 93.3 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-1A Centromere-1A locus 89 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Centromere-1A locus 78.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Centromere-1A locus 169.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Centromere-1A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-1A Centromere-1A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Centromere-1A locus 60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-1A Centromere-1A locus 51 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1A Centromere-1A locus 53.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-1A Centromere-1A locus 71.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Centromere-1A locus 32.8 - 42.6 () Automated name-based View Maps
XBE492937 locus -93 No other positions
XBE405778 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE405778 locus -85 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE405778 locus -152 () Automated name-based View Maps
XBE474204 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE474204 locus -152 () Automated name-based View Maps
XBE518223 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE518223 locus -152 () Automated name-based View Maps
XBF475048 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBF475048 locus -152 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBF475048 locus -85 () Automated name-based View Maps
XBF483881 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBF483881 locus -152 () Automated name-based View Maps
XBG606866 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBG606866 locus -152 () Automated name-based View Maps
XBM135313 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBM135313 locus -152 () Automated name-based View Maps
Xunl220 locus -65 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B Xunl220 locus -49 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl220 locus -58 () Automated name-based View Maps
XBE637867 locus 27 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE637867 locus 47 () Automated name-based View Maps
XBE473313 locus 27 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE473313 locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE473313 locus 71 () Automated name-based View Maps
XBE605005 locus 54 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B XBE605005 locus 89 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE605005 locus 71 () Automated name-based View Maps
Xunl207 locus 54 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl207 locus 71 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B Xunl207 locus 65 () Automated name-based View Maps
Xunl111 locus 54 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B Xunl111 locus 89 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl111 locus 71 () Automated name-based View Maps
1AS-0.86-1.00 breakpointinterval -100 - -86 No other positions
1AS-0.47-0.86 breakpointinterval -86 - -47 No other positions
C-1AS-0.20 breakpointinterval -20 - 0 No other positions
C-1AL-0.17 breakpointinterval 0 - 17 No other positions
1AL-0.17-0.38 breakpointinterval 17 - 38 No other positions
1AL-0.47-0.61 breakpointinterval 47 - 61 No other positions
1AS-0.45-0.47 breakpointinterval -47 - -45 No other positions
1AS-0.20-0.45 breakpointinterval -45 - -20 No other positions
1AL-0.38-0.46 breakpointinterval 38 - 46 No other positions
1AL-0.46-0.47 breakpointinterval 46 - 47 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.