CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, R Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-RGenes-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, R Genes [ View Map Set Info ]
Map Name: Ta-Physical-RGenes-1B
Map Start: -200.00
Map Stop: 100.00
Features by Type:
34 breakpoint
30 breakpointinterval
22 locus
86 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 86.       of 4 | Next
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-1B locus 0.00 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1B Centromere-1B locus 41.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1B Centromere-1B locus 48.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1B Centromere-1B locus 203.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-1B Centromere-1B locus 31.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1B Centromere-1B locus 35.80 - 39.10 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-1B Centromere-1B locus 76.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1B Centromere-1B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-1B Centromere-1B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1B Centromere-1B locus 37.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1B Centromere-1B locus 24.60 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-1B Centromere-1B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-1B Centromere-1B locus 13.50 () Automated name-based, Automated name-based View Maps
XBE405778 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE405778 locus -85.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE405778 locus -93.00 () Automated name-based View Maps
XBE474204 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE474204 locus -93.00 () Automated name-based View Maps
XBE518223 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE518223 locus -93.00 () Automated name-based View Maps
XBF475048 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBF475048 locus -85.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBF475048 locus -93.00 () Automated name-based View Maps
XBF483881 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBF483881 locus -93.00 () Automated name-based View Maps
XBG606866 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBG606866 locus -93.00 () Automated name-based View Maps
XBM135313 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBM135313 locus -93.00 () Automated name-based View Maps
Xunl220 locus -49.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A Xunl220 locus -65.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl220 locus -58.00 () Automated name-based View Maps
XBE637867 locus 47.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE637867 locus 27.00 () Automated name-based View Maps
XBE473313 locus 86.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE473313 locus 27.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE473313 locus 71.00 () Automated name-based View Maps
XBE605005 locus 89.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A XBE605005 locus 54.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE605005 locus 71.00 () Automated name-based View Maps
Xunl207 locus 65.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A Xunl207 locus 54.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl207 locus 71.00 () Automated name-based View Maps
Xunl111 locus 89.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Xunl111 locus 71.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1A Xunl111 locus 54.00 () Automated name-based View Maps
XBE492937a locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE492937a locus -85.00 () Automated name-based View Maps
XBE498831 locus -152.00 No other positions
XBE499561 locus -152.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE499561 locus -85.00 () Automated name-based View Maps
Xunl135 locus -42.00 No other positions
XBE444145 locus 47.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE444145 locus 71.00 () Automated name-based View Maps
Xunl143b locus 71.00 No other positions
XBE406625 locus 86.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D XBE406625 locus 71.00 () Automated name-based View Maps
Xunl128 locus 86.00 No other positions
1BS-1.50-1.54 breakpointinterval -154.00 - -150.00 No other positions
1BS-0.49-0.50 breakpointinterval -50.00 - -49.00 No other positions
1BS-0.35-0.49 breakpointinterval -49.00 - -35.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.