CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, R Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-RGenes-2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, R Genes [ View Map Set Info ]
Map Name: Ta-Physical-RGenes-2B
Map Start: -100.00
Map Stop: 100.00
Features by Type:
20 breakpoint
21 breakpointinterval
16 locus
57 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 57.       of 3 | Next
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-2B locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Centromere-2B locus 107.20 - 111.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2B Centromere-2B locus 139.60 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-2B Centromere-2B locus 84.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2B Centromere-2B locus 104.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-2B Centromere-2B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-2B Centromere-2B locus 78.00 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-2B Centromere-2B locus 103.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-2B Centromere-2B locus 110.50 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-2B Centromere-2B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Centromere-2B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2B Centromere-2B locus 112.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2B Centromere-2B locus 96.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2B Centromere-2B locus 100.00 () Automated name-based, Automated name-based View Maps
XBF200166 locus -95.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A XBF200166 locus -89.00 () Automated name-based View Maps
XBE499523 locus -95.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D XBE499523 locus -74.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A XBE499523 locus -89.00 () Automated name-based View Maps
XBF484266 locus -95.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D XBF484266 locus -74.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A XBF484266 locus -89.00 () Automated name-based View Maps
Xunl145 locus -83.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl145 locus -74.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Xunl145 locus -89.00 () Automated name-based View Maps
XBE591764 locus -46.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A XBE591764 locus -69.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D XBE591764 locus -74.00 () Automated name-based View Maps
Xunl147 locus -46.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Xunl147 locus -69.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl147 locus -74.00 () Automated name-based View Maps
Xunl149 locus -46.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl149 locus -74.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Xunl149 locus -69.00 () Automated name-based View Maps
XBE442854a locus -95.00 No other positions
XBE442802a locus -95.00 No other positions
XBE497251a locus -95.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D XBE497251a locus -74.00 () Automated name-based View Maps
Xunl216a locus -95.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl216a locus -74.00 () Automated name-based View Maps
XBE518335a locus -46.00 No other positions
XBE404328 locus 24.00 No other positions
Xunl110 locus 24.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl110 locus 19.00 () Automated name-based View Maps
Xunl136 locus 79.00 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2D Xunl136 locus 81.00 () Automated name-based View Maps
2BS-0.89-1.00 breakpointinterval -100.00 - -89.00 No other positions
2BS-0.83-0.84 breakpointinterval -84.00 - -83.00 No other positions
2BS-0.40-0.53 breakpointinterval -53.00 - -40.00 No other positions
C-2BL-0.16 breakpointinterval 0.00 - 16.00 No other positions
2BL-0.16-0.35 breakpointinterval 16.00 - 35.00 No other positions
2BL-0.69-0.89 breakpointinterval 69.00 - 89.00 No other positions
2BS-0.84-0.89 breakpointinterval -89.00 - -84.00 No other positions
2BS-0.81-0.83 breakpointinterval -83.00 - -81.00 No other positions
2BS-0.79-0.81 breakpointinterval -81.00 - -79.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.