CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Chinese_Spring_Deletion_SSR_2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, SSR [ View Map Set Info ]
Map Name: Chinese_Spring_Deletion_SSR_2D
Map Start: -1.00
Map Stop: 1.00
Features by Type:
7 breakpointinterval
43 locus
50 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 50.       of 2 | Next
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm261-2D locus -0.16 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm261-2D locus 70.70 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2D Xgwm261-2D locus 33.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm261-2D locus 30.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm261-2D locus 15.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm261-2D locus 10.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm261-2D locus 23.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm261-2D locus 45.00 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm261-2D locus 26.00 () Automated name-based, Automated name-based View Maps
Xcfd53-2D locus -0.40 Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2D Xcfd53-2D locus 5.40 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xcfd53-2D locus 16.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xcfd53-2D locus 40.00 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xcfd53-2D locus 22.50 () Automated name-based, Automated name-based View Maps
Xgwm102-2D locus -0.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm102-2D locus 48.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm102-2D locus 94.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm102-2D locus 94.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2D Xgwm102-2D locus 62.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm102-2D locus 111.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm102-2D locus 36.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm102-2D locus 73.40 () Automated name-based, Automated name-based View Maps
Xcfd11-2D locus -0.73 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xcfd11-2D locus 38.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xcfd11-2D locus 100.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xcfd11-2D locus 81.10 () Automated name-based View Maps
Xgwm539-2D locus 0.25 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm539-2D locus 151.80 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xgwm539-2D locus 148.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm539-2D locus 114.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm539-2D locus 59.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm539-2D locus 136.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm539-2D locus 138.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm539-2D locus 149.10 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xgwm539-2D locus 98.81 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm539-2D locus 117.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm539-2D locus 90.90 () Automated name-based, Automated name-based View Maps
Xcfd73-2D locus 0.88 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xcfd73-2D locus 141.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xcfd73-2D locus 77.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xcfd73-2D locus 150.10 () Automated name-based, Automated name-based View Maps
Xgwm301-2D locus 0.88 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm301-2D locus 190.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm301-2D locus 179.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm301-2D locus 146.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm301-2D locus 78.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm301-2D locus 107.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm301-2D locus 225.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm301-2D locus 190.00 () Automated name-based, Automated name-based View Maps
Xgwm349-2D locus 0.25 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xgwm349-2D locus 143.79 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm349-2D locus 179.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm349-2D locus 147.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm349-2D locus 93.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm349-2D locus 164.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm349-2D locus 194.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm349-2D locus 196.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm349-2D locus 79.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm349-2D locus 237.40 () Automated name-based View Maps
Xgdm35-2D locus -0.73 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-2D Xgdm35-2D locus 15.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgdm35-2D locus 4.70 () Automated name-based, Automated name-based View Maps
Xgdm107-2D locus -0.73 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-2D Xgdm107-2D locus 55.40 () Automated name-based, Automated name-based View Maps
Xgdm6-2D locus 0.88 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-2D Xgdm6-2D locus 141.70 () Automated name-based, Automated name-based View Maps
Xgdm87-2D locus 0.88 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-2D Xgdm87-2D locus 156.10 () Automated name-based, Automated name-based View Maps
Xbarc95-2D locus -0.73 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xbarc95-2D locus 17.80 () Automated name-based, Automated name-based View Maps
Xgwm455-2D locus -0.73 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2D Xgwm455-2D locus 25.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm455-2D locus 32.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm455-2D locus 24.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm455-2D locus 61.60 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm455-2D locus 32.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm455-2D locus 24.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xgwm455-2D locus 23.60 () Automated name-based, Automated name-based View Maps
Xbarc159-2D locus 0.88 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xbarc159-2D locus 148.90 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xbarc159-2D locus 101.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xbarc159-2D locus 80.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xbarc159-2D locus 188.30 () Automated name-based, Automated name-based View Maps
Xgwm30-2D locus 0.25 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm30-2D locus 64.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm30-2D locus 48.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm30-2D locus 92.90 () Automated name-based, Automated name-based View Maps
Xgwm382-2D locus 0.88 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm382-2D locus 100.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm382-2D locus 249.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm382-2D locus 75.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm382-2D locus 147.20 () Automated name-based, Automated name-based View Maps
Xgwm210-2D locus -0.73 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm210-2D locus 18.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm210-2D locus 26.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm210-2D locus 52.20 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm210-2D locus 22.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm210-2D locus 24.50 () Automated name-based, Automated name-based View Maps
Xgwm296-2D locus -0.73 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm296-2D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm296-2D locus 33.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm296-2D locus 25.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm296-2D locus 52.60 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm296-2D locus 7.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm296-2D locus 23.80 () Automated name-based, Automated name-based View Maps
Xgwm484-2D locus -0.16 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm484-2D locus 40.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm484-2D locus 56.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm484-2D locus 27.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xgwm484-2D locus 14.89 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm484-2D locus 53.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm484-2D locus 100.00 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm484-2D locus 77.40 () Automated name-based, Automated name-based View Maps
Xgwm515-2D locus -0.73 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm515-2D locus 122.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm515-2D locus 84.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm515-2D locus 62.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm515-2D locus 44.70 () Automated name-based, Automated name-based View Maps
Xgwm157-2D locus 0.63 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm157-2D locus 54.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm157-2D locus 73.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm157-2D locus 137.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm157-2D locus 107.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm157-2D locus 98.00 () Automated name-based, Automated name-based View Maps
Xgwm608-2D locus 0.25 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm608-2D locus 169.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm608-2D locus 87.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm608-2D locus 138.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm608-2D locus 153.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm608-2D locus 61.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm608-2D locus 117.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2D Xgwm608-2D locus 0.00 () Automated name-based View Maps
Xgwm320-2D locus 0.25 Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm320-2D locus 189.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm320-2D locus 147.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D Xgwm320-2D locus 156.69 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2D Xgwm320-2D locus 197.80 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm320-2D locus 100.90 () Automated name-based, Automated name-based View Maps
Xgwm311-2D locus 0.88 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm311-2D locus 147.40 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.