CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-1D
Map Start: 0.00
Map Stop: 250.30
Features by Type:
101 locus
101 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 101.       of 5 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm155-1D locus 250.30 No other positions
Xcfa2040-1D locus 249.10 No other positions
Xwmc173-1D locus 227.90 No other positions
Xgpw5261-1D locus 220.50 No other positions
Xwmc153-1D locus 221.30 No other positions
Xgpw2255-1D locus 210.30 No other positions
XksuI27-1D.2 locus 179.10 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D XksuI27-1D.2 locus 151.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D XksuI27-1D.2 locus 151.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D XksuI27-1D.2 locus 147.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D XksuI27-1D.2 locus 191.10 () Automated name-based View Maps
Xgpw1077-1D locus 177.40 No other positions
Xgpw2196-1D locus 175.10 No other positions
Xcfd282-1D locus 173.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xcfd282-1D locus 108.00 () Automated name-based View Maps
Xcdo1420-1D locus 171.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xcdo1420-1D locus 141.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xcdo1420-1D locus 137.70 () Automated name-based View Maps
Xcfa2187-1D locus 170.50 No other positions
Xgpw2224-1D locus 170.10 No other positions
Xcfa2147-1D locus 165.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xcfa2147-1D locus 112.00 () Automated name-based View Maps
Xmwg693-1D locus 164.10 No other positions
Xgwm232-1D locus 163.60 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm232-1D locus 0.71 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm232-1D locus 166.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xgwm232-1D locus 107.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm232-1D locus 130.40 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1D Xgwm232-1D locus 63.00 () Automated name-based View Maps
Xfba279-1D locus 160.40 No other positions
Xgpw5082-1D locus 159.60 No other positions
Xbcd508-1D locus 159.50 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xbcd508-1D locus 137.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xbcd508-1D locus 120.50 () Automated name-based View Maps
Xfbb275-1D locus 143.00 No other positions
XATPase-1D (ATPase) locus 141.30 No other positions
Xgpw4311-1D locus 139.90 No other positions
XAdh-1D (Adh) locus 134.00 No other positions
Xmwg676-1D locus 133.70 No other positions
Xcfa2170-1D locus 231.50 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.