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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
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Maps Ta-Synthetic/Opata-GPW-2A
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-2A
Map Start: -3.00
Map Stop: 180.30
Features by Type:
129 locus
129 Total

Map Features

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Items 1 to 25 of 129.       of 6 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgpw3251-2A locus 87.20 No other positions
Xcfd267-2A locus 180.30 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xcfd267-2A locus 163.70 () Automated name-based View Maps
Xgpw4456-2A locus 165.50 No other positions
Xgpw8034-2A locus 163.90 No other positions
Xfba314-2A locus 163.90 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba314-2A locus 120.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba314-2A locus 186.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2A Xfba314-2A locus 142.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-2A Xfba314-2A locus 159.90 () Automated name-based View Maps
Xgpw8238-2A locus 158.00 No other positions
Xfba385-2A locus 157.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba385-2A locus 102.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba385-2A locus 162.50 () Automated name-based View Maps
Xgpw4474-2A locus 155.70 No other positions
Xgwm265-2A locus 154.80 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm265-2A locus 112.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm265-2A locus 133.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm265-2A locus 0.93 () Automated name-based View Maps
Xgpw2046-2A locus 153.00 No other positions
Xbcd410-2A locus 151.50 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd410-2A locus 169.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd410-2A locus 110.70 () Automated name-based View Maps
XksuF41-2A locus 148.90 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A XksuF41-2A locus 105.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A XksuF41-2A locus 167.60 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2A XksuF41-2A locus 42.30 () Automated name-based View Maps
Xgpw7727-2A locus 147.40 No other positions
Xgpw4430-2A locus 146.00 No other positions
Xgpw2281-2A locus 144.70 No other positions
Xgpw2229-2A locus 143.50 No other positions
Xgpw2206-2A locus 142.60 No other positions
XwmcD6-2A locus 138.70 No other positions
Xgwm47-2A.1 locus 130.90 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-2A Xgwm47-2A.1 locus 34.80 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2A Xgwm47-2A.1 locus 6.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm47-2A.1 locus 86.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm47-2A.1 locus 113.80 () Automated name-based View Maps
Xfba276-2A locus 129.70 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba276-2A locus 88.50 () Automated name-based View Maps
Xgwm47-2A.2 locus 128.60 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2A Xgwm47-2A.2 locus 15.80 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-2A Xgwm47-2A.2 locus 39.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm47-2A.2 locus 118.45 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm47-2A.2 locus 90.90 () Automated name-based View Maps
XksuG5-2A locus 125.70 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A XksuG5-2A locus 90.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A XksuG5-2A locus 135.50 () Automated name-based View Maps
Xgpw3249-2A locus 123.80 No other positions
Xgwm445-2A locus 121.50 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xgwm445-2A locus 0.43 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xgwm445-2A locus 68.20 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2A Xgwm445-2A locus 27.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xgwm445-2A locus 113.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xgwm445-2A locus 86.70 () Automated name-based View Maps
Xfbb353-2A locus 118.80 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfbb353-2A locus 84.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfbb353-2A locus 126.70 () Automated name-based View Maps

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