CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-2B
Map Start: -57.50
Map Stop: 174.30
Features by Type:
130 locus
130 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 130.       of 6 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xfba310-2B locus 174.30 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfba310-2B locus 102.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfba310-2B locus 178.70 () Automated name-based View Maps
Xcfd50-2B locus 156.00 No other positions
Xgpw7772-2B locus 154.30 No other positions
Xgpw4474-2B locus 150.80 No other positions
Xgwm619-2B locus 149.10 Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Xgwm619-2B locus 107.80 () Automated name-based View Maps
XksuD17-2B locus 143.10 No other positions
Xabc303-2B locus 140.10 No other positions
Xgpw4487-2B locus 137.30 No other positions
Xfba385-2B locus 136.40 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfba385-2B locus 157.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfba385-2B locus 88.60 () Automated name-based View Maps
Xcmwg660-2B locus 133.50 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xcmwg660-2B locus 199.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-2B Xcmwg660-2B locus 160.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xcmwg660-2B locus 153.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2B Xcmwg660-2B locus 182.30 () Automated name-based View Maps
Xfba359-2B locus 130.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfba359-2B locus 83.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-2B Xfba359-2B locus 155.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfba359-2B locus 147.30 () Automated name-based View Maps
Xgpw7506-2B locus 128.40 No other positions
Xfbb113-2B locus 119.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfbb113-2B locus 72.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2B Xfbb113-2B locus 168.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfbb113-2B locus 138.60 () Automated name-based View Maps
Xgpw4043-2B locus 105.40 No other positions
Xcfd267-2B locus 101.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xcfd267-2B locus 0.18 () Automated name-based View Maps
Xfba102-2B locus 99.00 No other positions
XpKabaG-2B (PK) locus 95.10 No other positions
Xfba276-2B locus 95.10 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfba276-2B locus 118.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfba276-2B locus 62.40 () Automated name-based View Maps
Xfba117-2B locus 95.10 No other positions
Xgpw4103-2B locus 89.70 No other positions
Xfbb284-2B locus 86.60 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Xfbb284-2B locus 117.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xfbb284-2B locus 59.00 () Automated name-based View Maps
Xgpw4165-2B locus 86.50 No other positions
Xgwm47-2B locus 86.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm47-2B locus 58.20 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2B Xgwm47-2B locus 122.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm47-2B locus 144.95 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2B Xgwm47-2B locus 152.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm47-2B locus 83.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Xgwm47-2B locus 46.80 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm47-2B locus 0.18 () Automated name-based View Maps
Xgpw4396-2B locus 83.40 No other positions
Xcfd73-2B locus 83.00 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xcfd73-2B locus 0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xcfd73-2B locus 82.40 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.