CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-3D
Map Start: -12.80
Map Stop: 153.30
Features by Type:
129 locus
129 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 129.       of 6 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
XCB-3DL locus 153.30 No other positions
Xfbb117-3D.2 locus 145.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfbb117-3D.2 locus 156.90 () Automated name-based View Maps
Xgpw5235-3D locus 136.20 No other positions
Xgpw5263-3D locus 135.90 No other positions
Xgpw5001-3D locus 134.40 No other positions
Xgpw294-3D locus 132.50 No other positions
Xfbb147-3D locus 131.90 Wheat ABD - Wheat, Synthetic x Opata, upda - Ta-Synthetic/Opata-update-3D Xfbb147-3D locus 225.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfbb147-3D locus 140.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfbb147-3D locus 75.20 () Automated name-based View Maps
Xgpw5094-3D locus 131.70 No other positions
Xgpw5067-3D locus 131.60 No other positions
Xgpw5198-3D locus 131.10 No other positions
Xgpw7114-3D locus 130.50 No other positions
Xgpw5064-3D locus 130.50 No other positions
Xgpw4136-3D locus 130.50 No other positions
Xpsr904-3D locus 126.00 Wheat ABD - Wheat, Gale - Ta-Gale-3D Xpsr904-3D locus 62.40 () Automated name-based View Maps
XksuE14-3D locus 123.70 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D XksuE14-3D locus 156.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, upda - Ta-Synthetic/Opata-update-3D XksuE14-3D locus 236.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-3D XksuE14-3D locus 124.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XksuE14-3D locus 81.60 () Automated name-based View Maps
Xcfd211-3D locus 116.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xcfd211-3D locus 43.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3D Xcfd211-3D locus 0.91 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3D Xcfd211-3D locus 172.50 () Automated name-based View Maps
Xcfd213-3D locus 113.50 No other positions
XksuD19-3D locus 112.90 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D XksuD19-3D locus 76.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D XksuD19-3D locus 124.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, upda - Ta-Synthetic/Opata-update-3D XksuD19-3D locus 199.00 () Automated name-based View Maps
Xfbb117-3D.1 locus 112.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfbb117-3D.1 locus 137.20 () Automated name-based View Maps
XksuH5-3D locus 111.10 No other positions
Xbcd372-3D locus 101.90 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xbcd372-3D locus 114.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, upda - Ta-Synthetic/Opata-update-3D Xbcd372-3D locus 169.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xbcd372-3D locus 63.50 () Automated name-based View Maps
Xcfd127-3D locus 98.20 No other positions
Xcfd201-3D locus 97.80 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3D Xcfd201-3D locus 24.80 () Automated name-based View Maps
Xfba330-3D locus 97.10 Wheat ABD - Wheat, Synthetic x Opata, upda - Ta-Synthetic/Opata-update-3D Xfba330-3D locus 162.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3D Xfba330-3D locus 64.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Xfba330-3D locus 70.10 () Automated name-based View Maps
Xgpw7643-3D locus 93.10 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.