CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-6B
Map Start: -22.80
Map Stop: 120.50
Features by Type:
102 locus
102 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 102.       of 5 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xfbb59-6B.2 locus 120.50 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfbb59-6B.2 locus 78.00 () Automated name-based View Maps
Xgpw7303-6B locus 105.30 No other positions
Xfbb70-6B locus 105.30 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xfbb70-6B locus 90.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfbb70-6B locus 57.00 () Automated name-based View Maps
Xfbb59-6B.1 locus 105.30 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfbb59-6B.1 locus 59.00 () Automated name-based View Maps
Xgpw7262-6B locus 100.50 No other positions
Xmwg74-6B locus 98.40 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xmwg74-6B locus 50.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xmwg74-6B locus 80.20 () Automated name-based View Maps
Xfbb221-6B locus 96.80 No other positions
Xfbb276-6B locus 94.90 No other positions
Xfbb130-6B locus 75.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xfbb130-6B locus 60.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfbb130-6B locus 32.80 () Automated name-based View Maps
Xfba111-6B locus 73.20 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfba111-6B locus 31.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xfba111-6B locus 62.20 () Automated name-based View Maps
Xabg473-6B locus 71.50 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xabg473-6B locus 30.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xabg473-6B locus 61.30 () Automated name-based View Maps
Xgpw5037-6B locus 65.40 No other positions
XCB-6BL locus 65.10 No other positions
Xwg341-6B locus 63.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xwg341-6B locus 85.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xwg341-6B locus 53.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xwg341-6B locus 23.20 () Automated name-based View Maps
Xgpw5076-6B locus 55.90 No other positions
Xgpw2060-6B locus 55.60 No other positions
Xfbb364-6B locus 55.00 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xfbb364-6B locus 15.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xfbb364-6B locus 43.50 () Automated name-based View Maps
Xgpw3241-6B locus 55.00 No other positions
Xgwm626-6B locus 54.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Xgwm626-6B locus 77.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-6B Xgwm626-6B locus 152.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xgwm626-6B locus 45.30 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xgwm626-6B locus 47.70 () Automated name-based View Maps
Xrz273-6B locus 52.60 No other positions
Xbcd2014-6B locus 52.00 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6B Xbcd2014-6B locus 43.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Xbcd2014-6B locus 12.30 () Automated name-based View Maps
Xwmc182-6B locus 51.90 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-6B Xwmc182-6B locus 63.80 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Xwmc182-6B locus 30.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B Xwmc182-6B locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-6B Xwmc182-6B locus 43.80 () Automated name-based View Maps
Xabc303-6B locus 50.60 No other positions
Xgpw5130-6B locus 49.90 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6B Xgpw5130-6B locus 0.38 () Automated name-based View Maps
Xgpw4071-6B locus 49.00 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.