CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-6D
Map Start: 0.00
Map Stop: 185.30
Features by Type:
109 locus
109 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 109.       of 5 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgpw5210-6D locus 181.30 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw5210-6D locus 0.90 () Automated name-based View Maps
Xgpw5207-6D locus 181.30 No other positions
Xgpw5205-6D locus 181.30 No other positions
Xgpw5125-6D locus 181.30 No other positions
Xgpw5179-6D locus 181.20 No other positions
Xgpw7433-6D locus 181.10 No other positions
Xgpw7303-6D locus 181.10 No other positions
Xfbb59-6D locus 178.90 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb59-6D locus 103.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfbb59-6D locus 106.70 () Automated name-based View Maps
Xgpw4372-6D locus 150.80 No other positions
Xgpw362-6D locus 145.70 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw362-6D locus 0.90 () Automated name-based View Maps
XksuD1-6D locus 141.40 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D XksuD1-6D locus 61.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D XksuD1-6D locus 91.80 () Automated name-based View Maps
XHV5-6D locus 130.40 No other positions
Xmtd12-6D (Dehydrin) locus 130.30 No other positions
Xfbb169-6D locus 130.30 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfbb169-6D locus 75.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfbb169-6D locus 53.20 () Automated name-based View Maps
Xmtd11-6D (Dehydrin) locus 129.50 No other positions
Xtam28-6D locus 128.50 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xtam28-6D locus 55.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xtam28-6D locus 80.30 () Automated name-based View Maps
Xmwg669-6D locus 128.10 No other positions
Xgpw2232-6D locus 126.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw2232-6D locus 0.77 () Automated name-based View Maps
Xgpw5076-6D locus 103.20 No other positions
Xgpw4308-6D locus 103.20 No other positions
Xgpw312-6D locus 103.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw312-6D locus 0.77 () Automated name-based View Maps
Xgpw5130-6D locus 103.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw5130-6D locus 0.71 () Automated name-based View Maps
Xfba381-6D locus 97.80 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba381-6D locus 16.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfba381-6D locus 72.10 () Automated name-based View Maps
Xgpw8068-6D locus 95.60 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D Xgpw8068-6D locus 0.57 () Automated name-based View Maps
Xgpw5135-6D locus 95.30 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.