CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-1D
Map Start: 0.00
Map Stop: 191.80
Features by Type:
19 locus
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-1D locus 68.90 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Centromere-1D locus 42.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Centromere-1D locus 50.50 - 54.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Centromere-1D locus 46.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1D Centromere-1D locus 41.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Centromere-1D locus 56.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Centromere-1D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-1D Centromere-1D locus 0.00 () Automated name-based, Automated name-based View Maps
Xcdo312-1D locus 96.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xcdo312-1D locus 91.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xcdo312-1D locus 70.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xcdo312-1D locus 91.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xcdo312-1D locus 11.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xcdo312-1D locus 111.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xcdo312-1D locus 67.40 () Automated name-based, Automated name-based View Maps
Xmwg733-1D locus 122.60 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg733-1D locus 114.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xmwg733-1D locus 31.10 () Automated name-based, Automated name-based View Maps
Xcsd19(Adh)-1D locus 143.00 Wheat ABD - Wheat, Gale - Ta-Gale-1D Xcsd19(Adh)-1D locus 42.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xcsd19(Adh)-1D locus 128.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xcsd19(Adh)-1D locus 102.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xcsd19(Adh)-1D locus 109.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xcsd19(Adh)-1D locus 50.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xcsd19(Adh)-1D locus 105.60 () Automated name-based, Automated name-based View Maps
Xbcd1261-1D locus 171.10 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xbcd1261-1D locus 132.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xbcd1261-1D locus 73.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xbcd1261-1D locus 133.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xbcd1261-1D locus 175.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xbcd1261-1D locus 156.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xbcd1261-1D locus 125.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xbcd1261-1D locus 162.10 () Automated name-based View Maps
Xwg241-1D locus 191.80 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xwg241-1D locus 175.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xwg241-1D locus 195.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xwg241-1D locus 152.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xwg241-1D locus 154.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xwg241-1D locus 93.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xwg241-1D locus 155.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwg241-1D locus 182.80 () Automated name-based View Maps
Xabc156-1D locus 42.10 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xabc156-1D locus 29.40 () Automated name-based, Automated name-based View Maps
Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii Xabc156-1D locus 38.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xabc156-1D locus 36.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xabc156-1D locus 22.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xabc156-1D locus 32.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xabc156-1D locus 26.50 () Automated name-based, Automated name-based View Maps
XATPase-1D locus 150.30 Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D XATPase-1D locus 138.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D XATPase-1D locus 157.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D XATPase-1D locus 114.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D XATPase-1D locus 120.50 () Automated name-based, Automated name-based View Maps
Xfbb194-1D locus 90.70 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xfbb194-1D locus 83.80 () Automated name-based View Maps
Glu-D1 locus 104.70 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Glu-D1 locus 74.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Glu-D1 locus 18.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Glu-D1 locus 73.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Glu-D1 locus 80.00 () Automated name-based, Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-1D Glu-D1 locus 160.60 () Automated name-based, Automated name-based View Maps
Xwmc147-1D locus 18.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xwmc147-1D locus 16.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc147-1D locus 17.50 () Automated name-based View Maps
Xwmc216-1D locus 88.30 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1D Xwmc216-1D locus 31.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc216-1D locus 85.90 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xwmc216-1D locus 72.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xwmc216-1D locus 59.20 () Automated name-based, Automated name-based View Maps
Xfba259-1D locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xfba259-1D locus 0.00 () Automated name-based View Maps
Xfbb250-1D locus 18.50 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xfbb250-1D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xfbb250-1D locus 16.40 () Automated name-based View Maps
Xwhs179-1D locus 29.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwhs179-1D locus 24.60 () Automated name-based View Maps
Xwmc329-1D locus 44.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc329-1D locus 39.40 () Automated name-based View Maps
Xfbb237-1D locus 55.70 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xfbb237-1D locus 49.50 () Automated name-based View Maps
Xfba250-1D locus 64.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xfba250-1D locus 58.00 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xfba250-1D locus 37.90 () Automated name-based View Maps
Xmwg967-1D locus 74.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg967-1D locus 67.30 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.