CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-6D
Map Start: 0.00
Map Stop: 185.30
Features by Type:
14 locus
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
XksuG48-6D locus 28.90 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D XksuG48-6D locus 19.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D XksuG48-6D locus 25.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D XksuG48-6D locus -36.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D XksuG48-6D locus 17.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D XksuG48-6D locus 28.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D XksuG48-6D locus -57.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D XksuG48-6D locus -53.50 () Automated name-based, Automated name-based View Maps
Xpsr106-6D locus 56.10 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xpsr106-6D locus 44.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xpsr106-6D locus -25.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D Xpsr106-6D locus -21.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xpsr106-6D locus -33.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xpsr106-6D locus 56.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Xpsr106-6D locus 57.20 () Automated name-based, Automated name-based View Maps
Xcdo270-6D locus 74.60 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Xcdo270-6D locus 74.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xcdo270-6D locus 51.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xcdo270-6D locus -14.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xcdo270-6D locus 74.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xcdo270-6D locus -17.40 () Automated name-based, Automated name-based View Maps
Centromere-6D locus 80.60 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Centromere-6D locus 69.00 - 72.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Centromere-6D locus 90.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Centromere-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-6D Centromere-6D locus 40.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Centromere-6D locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6D Centromere-6D locus 108.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6D Centromere-6D locus 112.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Centromere-6D locus 81.50 () Automated name-based, Automated name-based View Maps
Xbcd1716-6D locus 89.00 Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xbcd1716-6D locus 1.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xbcd1716-6D locus 1.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xbcd1716-6D locus 89.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbcd1716-6D locus 62.60 () Automated name-based, Automated name-based View Maps
Xfba81-6D locus 121.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba81-6D locus 121.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Xfba81-6D locus 123.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xfba81-6D locus 89.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Xfba81-6D locus 107.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba81-6D locus 38.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xfba81-6D locus 32.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfba81-6D locus 71.30 () Automated name-based, Automated name-based View Maps
XksuE14-6D locus 136.40 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D XksuE14-6D locus 58.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D XksuE14-6D locus 138.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D XksuE14-6D locus 136.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D XksuE14-6D locus 86.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D XksuE14-6D locus 50.30 () Automated name-based, Automated name-based View Maps
Xbcd1510-6D locus 154.80 Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xbcd1510-6D locus 67.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xbcd1510-6D locus 76.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Xbcd1510-6D locus 157.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xbcd1510-6D locus 102.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xbcd1510-6D locus 154.80 () Automated name-based View Maps
XksuD27-6D locus 177.70 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D XksuD27-6D locus 108.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D XksuD27-6D locus 177.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D XksuD27-6D locus 130.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D XksuD27-6D locus 175.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D XksuD27-6D locus 148.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D XksuD27-6D locus 100.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D XksuD27-6D locus 87.10 () Automated name-based, Automated name-based View Maps
Xmwg2053-6D locus 185.30 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xmwg2053-6D locus 116.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xmwg2053-6D locus 185.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-6D Xmwg2053-6D locus 94.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-6D Xmwg2053-6D locus 183.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xmwg2053-6D locus 108.50 () Automated name-based, Automated name-based View Maps
Xfba85-6D locus 43.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba85-6D locus 43.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba85-6D locus -37.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6D Xfba85-6D locus 32.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-6D Xfba85-6D locus 36.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfba85-6D locus 34.60 () Automated name-based, Automated name-based View Maps
Xpsr899-6D locus 0.00 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xpsr899-6D locus -83.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D Xpsr899-6D locus -59.30 () Automated name-based, Automated name-based View Maps
Xfba307-6D locus 15.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-6D Xfba307-6D locus 13.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfba307-6D locus 15.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Xfba307-6D locus -70.50 () Automated name-based, Automated name-based View Maps
Xfbb231-6D locus 103.20 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-6D Xfbb231-6D locus 103.20 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.