CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-7B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-7B
Map Start: 0.00
Map Stop: 213.40
Features by Type:
15 locus
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc276-7B locus 194.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc276-7B locus 141.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xwmc276-7B locus 194.20 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7B Xwmc276-7B locus 191.40 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-7B Xwmc276-7B locus 182.20 () Automated name-based View Maps
Xfba42-7B locus 0.00 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xfba42-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B Xfba42-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xfba42-7B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Xfba42-7B locus -47.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xfba42-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xfba42-7B locus 11.40 () Automated name-based, Automated name-based View Maps
Xbcd310-7B locus 20.70 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xbcd310-7B locus 26.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xbcd310-7B locus 29.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xbcd310-7B locus 20.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xbcd310-7B locus 26.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Xbcd310-7B locus -14.60 () Automated name-based, Automated name-based View Maps
Centromere-7B locus 28.70 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Centromere-7B locus 45.00 - 48.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Centromere-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B Centromere-7B locus 45.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-7B Centromere-7B locus 56.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-7B Centromere-7B locus 45.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-7B Centromere-7B locus 119.70 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-7B Centromere-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-7B Centromere-7B locus 34.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Centromere-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-7B Centromere-7B locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-7B Centromere-7B locus 63.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B Centromere-7B locus 45.00 () Automated name-based, Automated name-based View Maps
Xwg514-7B locus 42.10 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xwg514-7B locus 56.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7B Xwg514-7B locus 67.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xwg514-7B locus 57.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xwg514-7B locus 40.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xwg514-7B locus 44.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Xwg514-7B locus 19.10 () Automated name-based, Automated name-based View Maps
XksuD2-7B locus 132.20 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B XksuD2-7B locus 115.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B XksuD2-7B locus 68.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B XksuD2-7B locus 130.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B XksuD2-7B locus 90.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B XksuD2-7B locus 102.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B XksuD2-7B locus 106.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7B XksuD2-7B locus 63.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7B XksuD2-7B locus 119.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B XksuD2-7B locus 110.80 () Automated name-based, Automated name-based View Maps
Xfbb189-7B locus 185.80 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7B Xfbb189-7B locus 161.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xfbb189-7B locus 137.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Xfbb189-7B locus 115.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xfbb189-7B locus 186.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xfbb189-7B locus 119.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xfbb189-7B locus 110.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B Xfbb189-7B locus 149.50 () Automated name-based, Automated name-based View Maps
Xcdo414-7B locus 198.50 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xcdo414-7B locus 115.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B Xcdo414-7B locus 160.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B Xcdo414-7B locus 150.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xcdo414-7B locus 116.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B Xcdo414-7B locus 126.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xcdo414-7B locus 197.00 () Automated name-based View Maps
XksuE18-7B locus 213.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B XksuE18-7B locus 102.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-7B XksuE18-7B locus 173.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-7B XksuE18-7B locus 140.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B XksuE18-7B locus 118.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7B XksuE18-7B locus 164.10 () Automated name-based, Automated name-based View Maps
Xfbb67-7B locus 135.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xfbb67-7B locus 136.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xfbb67-7B locus 100.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xfbb67-7B locus 84.50 () Automated name-based, Automated name-based View Maps
(Break2) locus 160.80 Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break2) locus 143.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-4A (Break2) locus 168.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5D (Break2) locus 68.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D (Break2) locus 23.90 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-2A (Break2) locus 139.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2A (Break2) locus 201.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5B (Break2) locus 248.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-2A (Break2) locus 117.60 () Automated name-based, Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H (Break2) locus 178.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-5A (Break2) locus 123.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6B (Break2) locus 86.00 () Automated name-based, Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break2) locus 157.60 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break2) locus 159.80 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A (Break2) locus 32.10 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break2) locus 278.90 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-7A (Break2) locus -46.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1B (Break2) locus 199.00 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break2) locus 173.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break2) locus 109.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D (Break2) locus 56.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D (Break2) locus 42.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break2) locus 119.40 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-7A (Break2) locus 43.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-6A (Break2) locus 155.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-6B (Break2) locus 136.00 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-7A (Break2) locus 53.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D (Break2) locus 196.00 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-3D (Break2) locus 170.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-4B (Break2) locus 255.20 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-MxM-AFLP-3B (Break2) locus 115.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break2) locus 140.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B (Break2) locus 42.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7D (Break2) locus 128.00 () Automated name-based View Maps
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-2B (Break2) locus 185.00 () Automated name-based, Automated name-based View Maps
Xabc310-7B locus 82.20 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xabc310-7B locus 94.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xabc310-7B locus 80.80 () Automated name-based View Maps
Xcdo686-7B locus 56.90 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Xcdo686-7B locus 67.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xcdo686-7B locus 54.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7B Xcdo686-7B locus 58.70 () Automated name-based, Automated name-based View Maps
(Break1) locus 107.20 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-3B (Break1) locus 40.40 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-1A (Break1) locus 56.40 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-5A (Break1) locus 69.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D (Break1) locus 28.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-2A (Break1) locus 62.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H (Break1) locus 36.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3D (Break1) locus 25.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3B (Break1) locus 25.00 () Automated name-based, Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-4B (Break1) locus 25.00 () Automated name-based, Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A (Break1) locus 217.10 () Automated name-based, Automated name-based View Maps
Xwmc166-7B locus 194.50 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-7B Xwmc166-7B locus 143.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7B Xwmc166-7B locus 193.80 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7B Xwmc166-7B locus 141.80 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.