CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, USG3209 x Jaypee
(Reference Set) 		Wheat ABD-Wheat, Louise x Penawawa
Min.
Correspondences
Align Vertically
Stack
Maps USG3209/Jaypee-2B Louise/Penawawa-2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, USG3209 x Jaypee [ View Map Set Info ]
Map Name: USG3209/Jaypee-2B
Map Start: 0.00
Map Stop: 259.30
Features by Type:
20 locus
1 qtl
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-2B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc55-2B locus 18.10 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2B Xbarc55-2B locus 106.22 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xbarc55-2B locus -0.64 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xbarc55-2B locus 54.80 () Automated name-based View Maps
Xgwm388-2B locus 138.90 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm388-2B locus 119.45 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm388-2B locus 71.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm388-2B locus 0.43 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Xgwm388-2B locus 11.80 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2B Xgwm388-2B locus 21.70 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2B Xgwm388-2B locus 126.18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xgwm388-2B locus 68.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm388-2B locus 44.30 () Automated name-based View Maps
Xbarc159-2B locus 242.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xbarc159-2B locus 109.00 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-2B Xbarc159-2B locus 103.70 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2B Xbarc159-2B locus 191.00 () Automated name-based View Maps
Xgwm410-2B locus 6.50 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2B Xgwm410-2B locus 73.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm410-2B locus 18.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm410-2B locus 82.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xgwm410-2B locus 44.20 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm410-2B locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm410-2B locus -0.64 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-2B Xgwm410-2B locus 44.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2B Xgwm410-2B locus 97.60 () Automated name-based View Maps
Xbarc200-2B locus 105.00 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xbarc200-2B locus -0.92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xbarc200-2B locus 8.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xbarc200-2B locus 37.20 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2B Xbarc200-2B locus 94.20 () Automated name-based View Maps
Xgwm47-2B locus 122.80 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2B Xgwm47-2B locus 152.10 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm47-2B locus 83.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Xgwm47-2B locus 46.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm47-2B locus 58.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm47-2B locus 144.95 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xgwm47-2B locus 86.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm47-2B locus 0.18 () Automated name-based View Maps
Xgwm526-2B locus 259.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm526-2B locus 183.50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm526-2B locus 0.18 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicocc - Tturgidum-SSR-2B Xgwm526-2B locus 90.40 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm526-2B locus 120.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2B Xgwm526-2B locus 161.80 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm526-2B locus 81.80 () Automated name-based View Maps
Xgwm257-2B locus 0.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm257-2B locus 37.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm257-2B locus 64.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xgwm257-2B locus 37.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2B Xgwm257-2B locus 72.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm257-2B locus -0.92 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm257-2B locus 12.30 () Automated name-based View Maps
Xgwm191-2B locus 101.70 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm191-2B locus 79.10 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicocco - Tt-Oxd-QTL-2B Xgwm191-2B locus 160.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xgwm191-2B locus 50.80 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xgwm191-2B locus 0.18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2B Xgwm191-2B locus 124.50 () Automated name-based View Maps
Xwmc175-2B locus 169.70 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2B Xwmc175-2B locus 84.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xwmc175-2B locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-2B Xwmc175-2B locus 130.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc175-2B locus 86.70 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2B Xwmc175-2B locus 96.20 () Automated name-based View Maps
Xksum45-2B locus 20.00 No other positions
Xwmc261-2B locus 37.30 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc261-2B locus 55.40 () Automated name-based View Maps
Xbarc167-2B locus 47.50 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xbarc167-2B locus 61.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2B Xbarc167-2B locus 37.30 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2B Xbarc167-2B locus 0.63 () Automated name-based View Maps
Xgwm271-2B locus 74.10 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xgwm271-2B locus 64.50 () Automated name-based View Maps
Xgwm501-2B.1 locus 128.90 No other positions
Xgwm501-2B.2 locus 156.10 No other positions
Xwmc317-2B locus 216.90 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc317-2B locus 105.60 () Automated name-based View Maps
Xwmc817-2B locus 221.00 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2B Xwmc817-2B locus 106.30 () Automated name-based View Maps
XwPt5736-2B locus 226.40 No other positions
XwPt8284-2B locus 226.40 No other positions
QPm.vag-2B qtl 105.00 - 138.90 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.