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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Wheat ABD-Wheat, USG3209 x Jaypee
(Reference Set)
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Correspondences
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Maps USG3209/Jaypee-4A
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, USG3209 x Jaypee [ View Map Set Info ]
Map Name: USG3209/Jaypee-4A
Map Start: 0.00
Map Stop: 40.50
Features by Type:
15 locus
15 Total

Map Features

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Items 1 to 15 of 15.
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-4A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc219-4A locus 29.40 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-4A Xwmc219-4A locus 87.60 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-4A Xwmc219-4A locus 126.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-4A Xwmc219-4A locus 160.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc219-4A locus 34.90 () Automated name-based View Maps
XwPt4487-4A locus 18.30 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A XwPt4487-4A locus 181.93 () Automated name-based View Maps
Xgwm350-4A locus 32.60 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4A Xgwm350-4A locus 64.70 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4A Xgwm350-4A locus 184.31 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4A Xgwm350-4A locus 113.50 () Automated name-based View Maps
XrPt0238-4A locus 0.00 No other positions
XwPt5172-4A locus 0.00 No other positions
XrPt7987-4A locus 18.30 No other positions
XrPt8283-4A locus 18.30 No other positions
XrPt2478-4A locus 18.40 No other positions
XwPt8657-4A locus 20.80 No other positions
XwPt1007-4A locus 23.00 No other positions
XwPt3729-4A locus 23.10 No other positions
XwPt2836-4A locus 23.50 No other positions
XwPt0023-4A locus 34.90 No other positions
XwPt9418-4A locus 40.50 No other positions
XwPt4424-4A locus 40.50 No other positions

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