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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat deletion-line bins
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-deletions-5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat deletion-line bins [ View Map Set Info ]
Map Name: CS-deletions-5A
Map Start: -1.00
Map Stop: 1.00
Features by Type:
9 breakpointinterval
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Wheat ABD - Wheat deletion-line bins - CS-deletions-5A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
5AS3-0.75-0.98 breakpointinterval -0.98 - -0.75 No other positions
5AS1-0.40-0.75 breakpointinterval -0.75 - -0.40 No other positions
C-5AS1-0.40 breakpointinterval -0.40 - 0.00 No other positions
5AL23-0.87-1.00 breakpointinterval 0.87 - 1.00 No other positions
5AS7/10-0.98-1.00 breakpointinterval -1.00 - -0.98 No other positions
C-5AL12-0.35 breakpointinterval 0.00 - 0.35 No other positions
5AL12-0.35-0.57 breakpointinterval 0.35 - 0.57 No other positions
5AL10-0.57-0.78 breakpointinterval 0.57 - 0.78 No other positions
5AL17-0.78-0.87 breakpointinterval 0.78 - 0.87 No other positions

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