CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Triticum-Genes-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
traitlocus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat genes [ View Map Set Info ]
Map Name: Triticum-Genes-1D
Map Start: -40.00
Map Stop: 18.70
Features by Type:
9 locus
3 traitlocus
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat ABD - Wheat genes - Triticum-Genes-1D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere locus 0.00 Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-2R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Centromere locus 126.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Centromere locus 77.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3 Centromere locus 60.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2D Centromere locus 128.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Centromere locus 23.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, CS x CS-CNN DS1A - Ta-Dubcovsky-1A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Centromere locus 51.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3B Centromere locus 87.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Centromere locus 52.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4B Centromere locus 19.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7B Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, IxT - Hordeum-Laurie5-2H Centromere locus 59.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B Centromere locus 36.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1A Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-1H Centromere locus 62.00 () Automated name-based, Automated name-based View Maps
Wheat AB - 1BS, durum x dicoccoides - 1BS, durum x dicoccoides Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Hart-6 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - 5DS, CS x RL5406 - 5DS, CS x RL5406 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Centromere locus 79.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, BxGP - Hordeum-Laurie1-2H Centromere locus 58.60 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-2A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - 5AS, T.m. G1777 x G2528 - 5AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7A Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H Centromere locus 69.40 () Automated name-based, Automated name-based View Maps
Wheat A - 1AS, T.m. G1777 x G2528 - 1AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-3R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-4H Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Centromere locus 38.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Centromere locus 28.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Centromere locus 58.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, CxHs - Hordeum-Laurie2-2H Centromere locus 74.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-2 Centromere locus 129.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7A Centromere locus 121.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Centromere locus 73.50 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-4A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-3A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticum, CS-G1777 DS1A^m^(1A) - TmTa-Dubcovsky-1A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-1R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3A Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-5H Centromere locus 38.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4D Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-7A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - 1BS, CS x CNN - 1BS, CS x CNN Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Centromere locus 50.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1A Centromere locus 56.50 () Automated name-based, Automated name-based View Maps
Wheat D - T.tauschii, Appels - Tt-Appels-1D Centromere locus 11.35 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Centromere locus 9.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D Centromere locus 0.00 () Automated name-based View Maps
Barley - 5HS, Steptoe x Morex - 5HS, Steptoe x Morex Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5B Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-7R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-6A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-5A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7B Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, G1777 x G2528 - Tm-Dubcovsky-1A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - 1AS, T.m. G3116 x DV92 - 1AS, T.m. G3116 x DV92 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - 5AS, T.m. G3116 x DV92 - 5AS, T.m. G3116 x DV92 Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-1A Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-5R Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5D Centromere locus 12.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2D Centromere locus 0.00 () Automated name-based, Automated name-based View Maps
Gli-1 locus -35.60 No other positions
Glu-D1 locus 18.70 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-1D Glu-D1 locus 104.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Glu-D1 locus 74.00 () Automated name-based, Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-1D Glu-D1 locus 160.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Glu-D1 locus 73.80 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Glu-D1 locus 80.00 () Automated name-based, Automated name-based View Maps
Glu-D3 locus -33.60 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Glu-D3 locus 3.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Glu-D3 locus 3.00 () Automated name-based, Automated name-based View Maps
Gpi-D1 locus -22.40 No other positions
Hk-D1 locus -2.70 No other positions
Sr18 locus 2.60 No other positions
Tri-D1 locus -13.40 No other positions
'Sr21' locus -27.00 No other positions
Lr21 traitlocus -40.00 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Rg2 traitlocus -38.00 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Rg2 traitlocus 7.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Rg2 traitlocus 1.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Rg2 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Sr33 traitlocus -27.00 Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii Sr33 traitlocus 30.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Sr33 traitlocus 25.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Sr33 traitlocus 15.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Sr33 traitlocus 5.50 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.