GrainGenes Home

 
GrainGenes Tools GrainGenes Database (the new MySQL version or the classic ACEDB one), sequence searches, map viewers.
  Browse GrainGenes
  Quick Queries
  Advanced Queries
  GrainGenes Classic
  BLAST
  CMap
  GBrowseBarley Bin Map
GrainMaps
Rice chromosomes vs. cereal genes
Wheat Physical EST Maps
Species PortalsData focused on individual crop species.
  Avena Ave.
  Barley Blvd.
Query Data Types Datasets of particular interest in GrainGenes SQL.
  Maps             An organized, annotated table of contents of the GrainGenes maps.
  Genetic MarkersProbes, primers and genes, with links to mapped locations.
  Sequences
  QTLs
  Gene ExpressionSequences from the Barley1 GeneChip, with links to BarleyBase.
  Colleagues
Web ResourcesBesides the Database, the GrainGenes Website includes a large array of other data resources, classified by topic here. See also the "Search Website" button above.
  Genomics
  Mapping
  Germplasm
  Pathology
  Taxonomy
  Publications
  Links to related sites
User ServicesJob openings, conference announcements, how to contribute your data, joining the grains mailgroup, ...
  What's New
  Employment
  Calendar
  Submit Data
  Database Information How to join the grains mailgroup.
About the GrainGenes Website and Database.
Mirror SitesOther Internet sites serving a copy of the GrainGenes Database and/or the GrainGenes Website.
GrainGenes  GrainGenes RSS Feed Link
Query (optional)   in Class 

GrainGenes Locus Report: vrs1

[ Printable Version ]  [ Submit comment/correction ]

Locus
vrs1  [ Marker Report ]
Type
Gene
Synonym
Synonymvrs1 (Hordeum)
Chromosome
2H
Map
Hordeum-AxK-2H82.4
[ Show all 15 ]
[ Show Nearby Loci ]
Bin
2H-Bin 9
In QTL
QDon.dah-2H.2
[ Show all 16 ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 15 ]
Species
Hordeum vulgare
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike
BGS Photo
BGS6a, Six-rowed spike 1  [ BGS Database ]
[ Show all 7 ]
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Remark
BGN 26 description:
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=vrs1+(Hordeum)
Number of populations contributing to the placement of Vrs1 in the Barley, Consensus 2006 DArT maps = 1

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.