GrainGenes Locus Report: EBmac0405

Locus	EBmac0405  [ Marker Report ]
Type	Microsatellite
Synonym	Synonym EBmac405
Chromosome	1H
Map	[ Hide all but 1 of 7 ] Barley, B73xCPI-1H 46.8 Hordeum-Consensus2005-SNP-1H 65.473 Hordeum-Consensus2007-SSR-1H 64.84 Hordeum-LiHs-SNP-1H 61.96 Hordeum-LxHs-1H 59 Hordeum-QTLConsensus-Abiotic-1H 65.47 Hordeum-QTLConsensus-Agronomic-1H 65.47
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 7 ]
Species	Hordeum spontaneum Hordeum vulgare
Probe	EBmac0405 EBmac405
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark	Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum Insert contains repeat (GT)16 Polymorphic Information Content (PIC) = 0.21 Developing laboratory = SCRI (R. Waugh)