GrainGenes Locus Report: POPA2_0306

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Locus	POPA2_0306  [ Marker Report ]
Type	SNP
Synonym	Synonym 11_20306   CDO1049
Chromosome	5H
Chromosome Arm	5HL
Map	Hordeum-OPA-2009-5H 58.7 Hordeum-OPA123-2008-5H 58.7 Hordeum-OPAConsensus-2011-5H 50.53 Hordeum-OWB-OPA2008-5H 66.008
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008
Probe	HAR35_1056
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 12 ] Marker name in barley Pilot OPA1 = 2_0306 Marker name in barley OPA1 = 11_20306 Original SNP name = 2146-2256 Most representative HarvEST:Barley Assembly #32 Unigene = 2146 Most representative HarvEST:Barley Assembly #35 Unigene = 1056 HarvEST Unigene 35 Probe Set = Contig3142_at; Contig3142_s_at; Contig3143_at Unigene 35 Rice Locus = LOC_Os09g02700 Description for best rice BLAST hit to Unigene 35 member = polyadenylate-binding protein 2, putative, expressed; E value = 0 Marker name in barley Pilot OPA2 = 2_0306 HarvEST Unigene 35 Probe Set = Contig3142_at, Contig3142_s_at, Contig3143_at Description for best rice BLAST hit to Unigene 35 member = protein polyadenylate-binding protein 2, putative, expressed; E value = 0 BLAST hit in the rice genome = polyadenylate-binding protein 2, putative, expressed