GrainGenes Locus Report: POPA2_1365

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Locus	POPA2_1365  [ Marker Report ]
Type	SNP
Synonym	Synonym 11_21365
Chromosome	5H
Chromosome Arm	5HS
Map	Hordeum-OPA-2009-5H 21.25 Hordeum-OPA123-2008-5H 21.25 Hordeum-OPAConsensus-2011-5H 16.15 Hordeum-OWB-OPA2008-5H 27.983
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008
Probe	HAR35_5250
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 2_1365 Marker name in barley OPA1 = 11_21365 Original SNP name = 8785-443 Most representative HarvEST:Barley Assembly #32 Unigene = 8785 Most representative HarvEST:Barley Assembly #35 Unigene = 5250 HarvEST Unigene 35 Probe Set = Contig11723_at Unigene 35 Rice Locus = LOC_Os02g22140 Description for best rice BLAST hit to Unigene 35 member = ADP-ribosylation factor, putative, expressed; E value = 7E-96 Marker name in barley Pilot OPA2 = 2_1365 Description for best rice BLAST hit to Unigene 35 member = protein ADP-ribosylation factor, putative, expressed; E value = 7E-96 BLAST hit in the rice genome = ADP-ribosylation factor, putative, expressed