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GrainGenes Map Data Report: Barley, Igri x Franka, SSR

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Map Data
Barley, Igri x Franka, SSR
Map
Hordeum-IxF-SSR-1H
[ Show all 7 ]
Species
Hordeum vulgare
Parent
Igri (barley)
Franka (barley)
Type
Genetic
Map Units
cM
Reference
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Contact
Roeder, Marion S.
Remarks
127 new SSRs from barley were named GBMS for 'Gatersleben Barley MicroSatellite, and mapped on two populations: Igri x Franka (this data set) and Steptoe x Morex (see 'Barley, Steptoe x Morex, SSR'). Confirmation of chromosome assignment was done on wheat (cv. 'Chinese Spring') / barley (cv. 'Betzes') addition lines.
Primer sequences for these SSRs are proprietary and those interested should contact Marion Roeder.
Raw locus data contain additional mapping data for markers from the SCRI which may be useful for the formation of consensus maps. The data were created by Jingzhao Li, Tatyana Sjakste and Martin Ganal.
Mapping scores are for progeny lines 1-16, 18-33, 50-52, 54-60, and 88-118.
In the mapping scores A=Franka, B=Igri.
Data Curator
Carollo, Victoria 
Locus
[ Hide all but 1 of 112 ]
ABC156d  
ABC161  
ABC175  
ABC302  
ABG358  
ABG380  
ABG387a  
ABG387b  
ABG391  
ABG4  
ABG458  
ABG461  
ABG472  
ABG476  
ABG495b  
ABG500A  
ABG500b  
BCD351e  
BG123a  
Bmac134AA-AB-BAB-AB-BAAAB-BB-BBBABA-AAAAAABAAABAB-ABABAAA ABBABAABAAABBAB-BAABBBA  
Bmac213BA-BB-BBA-BA-B---B-AB-ABBBAA-ABBAAAABAAAABBAABBBBA ABBBBBBABBBABBB-BBABBAB  
Bmac31AA-BB-BBA-BA-BBAAB-AA-BABBBB-BAAABABAABBBBABBBABAA BBABBBBBBABBBBB-BABAABB  
Bmag125AA-AA-AAA-AA-AAAAA-AA-AABBBB-BBBBAABABBABBBBAAABAA BABABBBABAAAAAA-BBAAAAA  
Bmag138BB-BB-BBA-AA-AABBA-AB-AAAAAB-AABBBBABABAABBABAAABA AABBAABABABBBAA-BABAAAA  
Bmag206AA-AA-ABB-BA-BBBBB-AA-AAABAB-BBBABAAAAAAAAABBBBAAB ABAABBBAAABBAAB-BBBBBBB  
Bmag223-B-BA-BBB-BA-BBBBB-BB-BBABAA-BA-ABBBBBABABABBABABB BABBBBAABABABBB-BAAABBB  
Bmag382AA-BA-AAA-AA-AAABB-AB-BBBBBA-BABAAAABABBBBBAAAAABA BABBBBBABABBAAA-ABBABBB  
Bmag500AB-AA-BBB--B-BBAAA-BB-A--BBA-BBBBAA-BB-ABAAAB-ABBA BBB-ABB-BBBBBBA-BBABAAB  
Bmag7AA-AA-ABB-BA-BBBBB-AA-AAA--B-BBBABAAAAAAAAABBBBAAB ABAABBBAAABBAAB-BBBBBBB  
BREAK1  
BREAK2  
Brz  
cMWG652a  
cMWG706A  
cMWG720  
cMWG733  
EBmac603AB-BB-ABB-AA-AABBA-AA-BAABAA-ABBBBAAAAAAAAAABAAABB BBAABBBAAABBABB-BABABBB  
EBmac755AA-BB-BBA-BB-ABBAA-AA-BABBAA-BABBAAAABBBBBABAABBBB ABBBBBAABABABAB-B-AABBB  
EBmac906BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA  
GBMS106AB-BA-BBB-BA-BBABB-BB-BBABAA-BABAABBBBABABABBABABA BABBBBAABAAABBB-BAAABBB  
GBMS107BB-BB-BBB-BB-BBAAA-BB-ABBBBA-BAABBBABAAAAAABBBAABB ABBABBAABBBBABA-BAAAABA  
GBMS11AA-AA-AAA-AA-AAAAA-AA-AABBBB-BBBBAAAABBAAABBBAAAAA BABABBBABABAAAA-BAAAAAB  
GBMS112AA-AA-BBA-AB-ABBAA-AA-BAABAA-AABBAAAABBBBBABBABABB ABBBBBAABABBBAB-BAAABBB  
GBMS114BA-BA-AAB-AA-AABBB-AB-BBBABB-BAABBBAABBBABABBABBAA BAABABABABBBBAA-BBAAAAA  
GBMS117BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBBBBABAABBBB-BBBBBAB  
GBMS120BA-BB-BBA-BA-ABBAA-AB-BABBBB-BABABABAABBBBABBBABB- BBABBBBBAABBABB-BABAABB  
GBMS128aBB-BB-BBA-AA-AABBA-AB-AAAAAB-AABBBBABABAABBA-AAABA AABAAABABABBBAA-B-BAAAA  
GBMS128bAA-AB-BAA-BA-BBBAA-AB-BAABAB-BBABBBABAAAAAABBBBBBA BAAABBBBBAAABBB-BBBBABA  
GBMS13AB-AA-ABB-BB-AAAAB-BA-BBBBAA-AAAAABBBBAAAAAABBAABA BABBBABABAABABB-BBAABBA  
GBMS138BA-BA-ABB-AA-AABBB-BB-AABABB-BBBBBABBABABAAAAAABAA ABBBBABBAABABBA-ABBBBAA  
GBMS14AA-BA-BBA-BA-AAABB-A--BBBBAA-ABAAAAABABABBBABBBBBA ABBBBBBAAABAABB-A-AABAB  
GBMS140BB-BB-BBB-BB-BBBBA-B--BABBAB-BBBBBBBBBBBBBBBBBBABA BB-BBBB-BAABBBB-BBBBBAB  
GBMS141BB-BB-BB---B-ABBAA-AB-B-BBBB-BABAB-BBB-BBBA--BAABA BB-BBBBB-ABB-BB-B-BAABB  
GBMS149BB-BB-BBB-BB-BBBAB-BB-BABB-B-BBBBBBBBBBBABBBBBBABB BBBBBBB-BAABBBB-BBBBBAB  
GBMS15BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAAB-BABBBAABAAA AAAABBABABBABAA-BBBBABA  
GBMS150BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA AAABBBA-ABBABAA-BBBBABA  
GBMS166BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBBBBABAABBBB-BBBBBAB  
GBMS17AA-BA-BBA-BA-AAABB-AB-BBBBAA-ABBAAAABABBBBBABABBAA BABBBBBAAABBABA-AAAA-AB  
GBMS174BB-BB-BAB-BB-BBABA-AB-BBABAB-BABBABBBBABBBBBBABA-A BABBABBAAABABBB-BBBABAB  
GBMS187BA-BB-ABA-AB-BAAAA-AB-AABBAA-ABBAAAABAAAAABAAABAAA ABBBBBBABBBBBBB-BBABBAA  
GBMS190BA-BA-BAB-BA-AABAB-AB-BBABAB-ABAAABABABBABBBAABAAA AAAABBBBABBABAA-BBBAABA  
GBMS200AA-AA-ABB-BB-BBBBB-AA-BBBBAA-ABABAABABAABBAABAABAA ABABBAAAABAAAAB-BAAAABA  
GBMS204B--BB-ABB-BB-BABAA-AB-BABBAB-BBBBBBBBBBBABBBBABBAB BAABBBBBBAABBBB-BB-BBAB  
GBMS216AA-BB-BAA-AA-BBBAA-AA-BAABAB-BBABBBABAAAAAABBBBBBA BAAABBBBBAAABBB-BBBBABA  
GBMS226AA-BB-ABA-AA-AABAA-AA-BABBAA-BAA-BABAAABBA-ABAABAB BBABBBBBAAABBBB-B-BAABB  
GBMS233AA--A-AAA-AA-AAAAA-AA-AABBBB-BBBBAABABBAAABBBAAAAA AABABBBABABAAAA-AAAAAAB  
GBMS235AA-AB-BAA-AA-AAAAA-BA-BABAAB-ABABAABABBAAABBBAAAAB AABABBBAABABAAB-ABAAAAB  
GBMS244AA-AA-AAA-AA-AABBA-AA-BAABBB-BBBBAABABAABBBBAAABAA BABABBBAAABA----------A  
GBMS28BB-BA-ABB-BA-ABBBA-BB-BBBBAB-BABBBBBABBBABAABABABA BAABAAABABABABA-BBAAABB  
GBMS29BA-BA-BAB-AA-AABAB-AA-BBABBB-BBABABAABABABBBAABBAA ABABBBA-ABBABAA-BBBBABA  
GBMS31AA-AB-BAB-AB-BAAAB-BB-BBBABA-AAAAAABAAA-ABAABABAAA ABBABAABAAABBAB-BAABBBA  
GBMS33BA-AA-BBB-AB-BBAAA-BB-ABABBA-BAAABBABBAABAAABAABBA BBBAABBABBBBBBA-BBABAAB  
GBMS37AA--A--BA--A-AAAAB-AB-BBBBAA-ABBAAAABABABBBABBBBAA AABBBBBAAABAABB-AAAABAB  
GBMS38AB--A-BAB-AA-AA-AB-BA-ABAAAB-BBBBBBBABABAAA-BABBAA BBBBBABBABAAAB--AAB-BBB  
GBMS45BA-BB-ABB-BB-BABAA-A---ABBAB-BBBBBBBBB-BABBBBABBAB BAABBBBBBAABBBB-BBBBBAB  
GBMS49BA-BA-BAB-AA-AA-AB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA  
GBMS50BB-BB-BBB-BB-BBBAB-BB-BABBAB-BBBBBBBBBBBBBBBBB-BB- BBBBBBBABAABBBB-BBBBBAB  
GBMS53AA-BB-AAB-AA-ABBBB-AB-BBBBBB-BABBAABBA-BBB-AAAAABA AABBBBB--BBABAB-ABBBABB  
GBMS57BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBB-BABAABBBB-BBBBBAB  
GBMS60AA-AB-BBB-BA-BABAA-AA-BBABBA-AABABAABABBBBAABBBBBA AAABABBBAAAABAA-ABBBAAB  
GBMS62BA-BB-BBA-AB-BAABA-AB-AABBAA-ABBAAAABAAAABBAABBBAA ABBBBBB--BBABBB-BBABBAB  
GBMS63BA-BB-BBA-BA-ABBBA-AB-BABBBB-BABABABAABBBBABBBABAA BBABBBBBAABBBBB-BABAABB  
GBMS66AA-AA-BAA-AA-AAAAA-BA-AABAAB-ABABAABABBAAABBBAAAAB AABABBBABBABAAB-AAAAAAB  
GBMS68BB-AB-BBB-BA-AAAAB-AA-BBABAA-AAAABABBAABBBAABBBABA BAAA-BBABAABBBA-ABBAABB  
GBMS72AB-AA-BBB-AB-BBAAA-BB-ABABBA-BAABBB-BBBABAABBA-BBB BBBAABB-BBBBBBB-BBABAAB  
GBMS74BA-BB-ABB-BB-BABAA-AB-BABBAB-BBBBBBBBBBBABBBBABBBB BBABBBBBBAABBBB-BBBBBAB  
GBMS75AB-BB-BAB-BB-BBBAB-AB-BBABAB-BAABABBBBAABBBBBABABA BABBABBAAABABBB-BBBABAB  
GBMS77AA-AB-BBB-BA-BABAA-A--BBABBA-AABABAABABBBBAA-BBBBA AAABABB-AAAABAA-ABBBAAB  
GBMS81BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA  
GBMS83BB-BB-BBB-BB-BBAAA-BB-ABBBBA-BAABBBABA-AAAABBBAABB ABBABBA-BBBBABA-BAAAABA  
GBMS88AB-B---BA-BB-AB-------BAB----------AA-------B----- ---BB--------BBB-------  
GBMS90AA-AB-BAB-AA-BAAAB-BB-BBAABB-AAAAAAAAABBABAABAAAAA AABABBAAAAAAAAB-BAAABBA  
GBMS93AA-BA-BBA-BA-AAABB-AB-BBBBAA-ABAAAAABABABBBABBBBBA AABBBBBAAABAABB-A-AABAB  
MWG503  
MWG522  
MWG555b  
MWG557  
MWG571a  
MWG58  
MWG584  
MWG635a  
MWG820  
MWG836  
MWG837  
MWG838  
MWG858  
MWG877  
MWG878  
MWG902  
MWG934  
MWG938  
WG622  

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