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GrainGenes Marker Report: BCD1270

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Locus
bcd1270
Type
RFLP
Map
Oat-KxO/2003-11_41+207.23
Oat-MxN_2005-120
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Oat, MxN, genetic 2005
Probe
BCD1270
Homology
BAB01837.1e-value: 4.6(AB028611) CHP-rich zinc finger protein-like [Arabidopsis thaliana]
Remark
Marker placement value = 3.18 cM on map Oat-KxO/2003-11_41+20
Marker is not a framework marker on map Oat-KxO/2003-11_41+20



Probe
BCD1270
Locus
Xbcd1270
bcd1270
Synonym
SynonymHAR35_7446
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438937
BCD1270_WHE04E07.s1
Polymorphism
BCD1270 EcoRI 
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
1.1
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD1270 KO autoradiogram
Data Source
Sorrells, Mark E.96.07



Locus for Probe
Xbcd1270
Type
RFLP
Map
Oat, D526 x Lang0.4
Oat-KxO-1117.3
Oat-KxO/AFLP-118
Oat-KxO/Q-1117.3
[ Show Nearby Loci ]
In QTL
Height, KxO-11-a
Height, KxO-11-b
Map Data
Oat, D526 x Lang
Oat, KxO
Oat, KxO, AFLP
Oat, KxO/QTL
Probe
BCD1270
Homology
BAB01837.1e-value: 4.6(AB028611) CHP-rich zinc finger protein-like [Arabidopsis thaliana]
Image
BCD1270 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Data Source
Bush, Arla L.97.09

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