GrainGenes Marker Report: BCD1270

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Locus	bcd1270
Type	RFLP
Map	Oat-KxO/2003-11_41+20 7.23 Oat-MxN_2005-12 0
	[ Show Nearby Loci ]
Map Data	Oat, KxO, 2003 Oat, MxN, genetic 2005
Probe	BCD1270
Homology	BAB01837.1 e-value: 4.6 (AB028611) CHP-rich zinc finger protein-like [Arabidopsis thaliana]
Remark	Marker placement value = 3.18 cM on map Oat-KxO/2003-11_41+20 Marker is not a framework marker on map Oat-KxO/2003-11_41+20
Probe	BCD1270
Locus	Xbcd1270 bcd1270
Synonym	Synonym HAR35_7446
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Lambda ZAP II library
Type	cDNA
Sequence	BE438937 BCD1270_WHE04E07.s1
Polymorphism	BCD1270 EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
PCR size	1.1
Clone Vector	pBluSK
Excision Enzyme	EcoRI
Vector PCR primers	M13forward M13reverse
Vector Amplification	94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic	Ampicillin
Clone Location	Sorrells, Mark E. GrainGenes Probe Repository
Clone Authority	Sorrells, Mark E.
Image	BCD1270 KO autoradiogram
Data Source	Sorrells, Mark E. 96.07
Locus for Probe	Xbcd1270
Type	RFLP
Map	Oat, D526 x Lang 0.4 Oat-KxO-11 17.3 Oat-KxO/AFLP-11 8 Oat-KxO/Q-11 17.3
	[ Show Nearby Loci ]
In QTL	Height, KxO-11-a Height, KxO-11-b
Map Data	Oat, D526 x Lang Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL
Probe	BCD1270
Homology	BAB01837.1 e-value: 4.6 (AB028611) CHP-rich zinc finger protein-like [Arabidopsis thaliana]
Image	BCD1270 KO autoradiogram
Reference	Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Data Source	Bush, Arla L. 97.09