GrainGenes Home

 
Query (optional)   in Class 

GrainGenes Marker Report: BCD266a

[ Printable Version ]  [ Submit comment/correction ]

Locus
BCD266a
Type
RFLP
Chromosome Arm
1AS
Map
Ta-Anderson-1A35
Tt-Gill-2D357.2
[ Show Nearby Loci ]
Map Data
T.tauschii
Probe
BCD266
Homology
AAD11455.2e-value: 1.3(U82549) sodium/potassium-transporting ATPase alpha-1 subunit [Oreochromis mossambicus]
AAD11455.2e-value: 2.1(U82549) sodium/potassium-transporting ATPase alpha-1 subunit [Oreochromis mossambicus]
Possible Orthologs
BCD266
[ Show all 6 ]



Probe for Locus
BCD266
Locus
Xbcd266-2
[ Show all 7 ]
Synonym
SynonymHAR35_15015
 HAR35_15016
 HAR35_33212
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Bar.LambZAPII
Type
cDNA
Sequence
BE438697
BE438789
BCD266_WHE1B0101
BCD266_WHE1B0102
Polymorphism
BCD266 EcoRI 
Linkage Group
[b 2L]
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1.5
PCR size
1.5
Clone Vector
pBluSK
pBluSK-
BS-SK-
lambda_Zap
pBS
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
m13reverse 5'AACAGCTATGACCATG
m13forward 5'GTAAAACGACGGCCACT
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD266 BROWS autoradiogram
Data Source
Sorrells, Mark E.96.07
ATMI92.09
Gill, Bikram S.92.09

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.