GrainGenes Home

 
Query (optional)   in Class 

GrainGenes Marker Report: cMWG654

[ Printable Version ]  [ Submit comment/correction ]

Locus
cMWG654
Type
RFLP
Synonym
SynonymPOPA1_0385
Chromosome
5H
Map
Barley-Consensus2-5H157.6
Hordeum-Bins-5H168
Hordeum-Graner2-5H176.2
Hv-Consensus2006-Marcel-5H144.93
Hv-Integrated2009-5H142.9
[ Show Nearby Loci ]
Map Data
Barley consensus 2
Barley, BinMap 2005
Barley, Consensus 2006, Marcel
Barley, Integrated, Marcel 2009
Barley, IxF
Probe
cMWG654
Data Source
Kleinhofs, Andris 
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka



Probe
cMWG654
Locus
cMWG654
cMWG654-5H
Synonym
SynonymHAR35_10660
 HAR35_15550
 HAR35_15551
Reference
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
cDNA
STS
STS primers
5' GTCCACGCCGTCCCCGATCT
5' CCGTCATCAAGGTTGGAGCA
STS size
ca. 500
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
AJ234406
CMWG654-5
DNA Library
cMWG
Source Species
Hordeum vulgare
Source Tissue
Leaf
Clone Vector
Bluescript
Clone Location
GrainGenes Probe Repository
Graner, Andreas
Clone Authority
Graner, Andreas
Data Source
Graner, Andreas94.03.08
Stein, Nils2006.10
Kuenzel, Gottfried00.03



Locus for Probe
cMWG654-5H
Map
Hv-Consensus2006-Stein-5H158.6
Hv-IxF-Stein-5H126.64
[ Show Nearby Loci ]
Map Data
Barley, Consensus 2006, Stein
Barley, IxF, Stein2006
Probe
cMWG654

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.