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GrainGenes Sequence Report: BE422730

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Sequence
BE422730
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0058_E04_J08ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0058_E04_J08, mRNA sequence.
Other Name
WHE0058_E04_J08ZS  [ wEST-ACEDB ]  [ wEST-mySQL ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0058_E04_J08
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.93045.1.S1_at 363  WHE2AFFY
TaAffx.93045.1.S1_at 309  WHE2AFFY
TaAffx.26850.1.S1_at 82  WHE2AFFY
TaAffx.53788.1.S1_at 80  WHE2AFFY
DNA
atgaagtagctcgagcggtcttctcatggtcatgatgttcgtcacggggt
ggcttcctccaacttgttttcctgcttgacaagcactgcacaatctatcc
ttgtcaaatataacatctttcactccaaggatatgatcacctttaataag
cttataaagatttcgcatgcacacatgacctaaccttctatgccacaacc
agcctttagaggatttagcaattaagcaagttctaggttgagccttttta
gtgaaatcaacaatgtaaatatcacctctacgtataccggtaaagaccat
attatgattatctcttcgaaacacttggcaatctacttcagtaaatggga
cattgaagccaaagttagcaagtctagatacggaaagtaaattatagcca
agagattcaacgagcataacattttgtatggagctatcatgtgagatggc
caccttaccaaggccaaccaccttaacctttgagttatcaccaaaggtga
catactntcgagggccgtcgctttcagctagctcacgaaacatatccttg
tctccggtcatgtgatcggtacatccactatcaaggactcattcctttc
BLAST
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