| Accession | Classification | Family name | TREP accession |
| PTREP100 | Retrotransposon, LINE, unknown | RIX_Ramona_109N23-1 | TREP1608 |
| PTREP101 | Retrotransposon, LTR, Copia | RLC_Ale_109N23-1 | TREP1610 |
| PTREP110 | Retrotransposon, LTR, Copia | RLC_Ikya_AY853252-1 | TREP2016 |
| PTREP111 | Retrotransposon, LTR, Copia | RLC_Lena_AY853252-1 | TREP2085 |
| PTREP112 | Retrotransposon, LTR, Copia | RLC_Oref_1020F19-1 | TREP1720 |
| PTREP113 | DNA transposon, TIR, Mutator | DTM_Oscar_AY853252-1 | TREP2024 |
| PTREP114 | Retrotransposon, LINE, unknown | RIX_Ramona_464G14-1 | TREP24 |
| PTREP116 | Retrotransposon, LINE, unknown | RIX_Stasy_294D11-1 | TREP1820 |
| PTREP117 | DNA transposon, unknown, unknown | DXX_Xitos_1020F19-1 | TREP1725 |
| PTREP119 | Retrotransposon, LINE, unknown | RIX_Yolanda_AY853252-1 | TREP2056 |
| PTREP12 | DNA transposon, TIR, Mutator | DTM_Joseph_AY146587-1 | TREP831 |
| PTREP120 | Retrotransposon, LTR, Copia | RLC_Zenia_AY853252-1 | TREP2012 |
| PTREP121 | Retrotransposon, LTR, Gypsy | RLG_Danae_231A16-1 | TREP1226 |
| PTREP124 | Retrotransposon, LTR, Copia | RLC_HORPIA2_AF427791-1 | TREP730 |
| PTREP125 | Retrotransposon, LTR, Copia | RLC_Ikya_EF067844-1 | TREP2288 |
| PTREP126 | Retrotransposon, LTR, Copia | RLC_Ikya_AY853252-1 | TREP2016 |
| PTREP127 | Retrotransposon, LINE, unknown | RIX_Nala_210J24-1 | TREP2314 |
| PTREP132 | Retrotransposon, LTR, Copia | RLC_Ivana_EF067844-1 | TREP2289 |
| PTREP14 | Retrotransposon, LINE, unknown | RIX_Karin_AY146587-1 | TREP832 |
| PTREP15 | Retrotransposon, LINE, unknown | RIX_Karin_AY146587-1 | TREP832 |
| PTREP150 | DNA transposon, Helitron, Helitron | DHH_Hector_AY642926-1 | TREP3300 |
| PTREP151 | DNA transposon, Helitron, Helitron | DHH_Hector_AY642926-1 | TREP3300 |
| PTREP152 | DNA transposon, Helitron, Helitron | DTC_Helios_consensus-1 | TREP3439 |
| PTREP153 | DNA transposon, TIR, HAT | DTA_Aurec_58l25-1 | TREP3002 |
| PTREP154 | DNA transposon, TIR, HAT | DTA_Harper_M801L24-1 | TREP3003 |
| PTREP155 | DNA transposon, TIR, CACTA | DTC_Alfred_consensus-1 | TREP3435 |
| PTREP156 | DNA transposon, TIR, CACTA | DTC_Alfred_consensus-1 | TREP3435 |
| PTREP157 | DNA transposon, TIR, CACTA | DTC_Aron_consensus-1 | TREP3401 |
| PTREP158 | DNA transposon, TIR, CACTA | DTC_Balduin_consensus-1 | TREP3412 |
| PTREP159 | DNA transposon, TIR, CACTA | DTC_Balduin_consensus-1 | TREP3412 |
| PTREP16 | DNA transposon, TIR, CACTA | DTC_Clifford_AY146588-1 | TREP774 |
| PTREP160 | DNA transposon, TIR, CACTA | DTC_Baldur_consensus-1 | TREP3418 |
| PTREP161 | DNA transposon, TIR, CACTA | DTC_Baldur_consensus-1 | TREP3418 |
| PTREP162 | DNA transposon, TIR, CACTA | DTC_Baron_consensus-1 | TREP3402 |
| PTREP163 | DNA transposon, TIR, CACTA | DTC_Baron_consensus-1 | TREP3402 |
| PTREP164 | DNA transposon, TIR, CACTA | DTC_Calvin_consensus-1 | TREP3420 |
| PTREP165 | DNA transposon, TIR, CACTA | DTC_Calvin_consensus-1 | TREP3420 |
| PTREP166 | DNA transposon, TIR, CACTA | DTC_Caspar_consensus-1 | TREP3413 |
| PTREP167 | DNA transposon, TIR, CACTA | DTC_Caspar_consensus-1 | TREP3413 |
| PTREP168 | DNA transposon, TIR, CACTA | DTC_Chester_consensus-1 | TREP3403 |
| PTREP169 | DNA transposon, TIR, CACTA | DTC_Chester_consensus-1 | TREP3403 |
| PTREP17 | DNA transposon, TIR, CACTA | DTC_Clifford_AY146588-1 | TREP774 |
| PTREP170 | DNA transposon, TIR, CACTA | DTC_Clifford_consensus-1 | TREP3414 |
| PTREP171 | DNA transposon, TIR, CACTA | DTC_Clifford_consensus-1 | TREP3414 |
| PTREP172 | DNA transposon, TIR, CACTA | DTC_Conan_consensus-1 | TREP3415 |
| PTREP173 | DNA transposon, TIR, CACTA | DTC_Conan_consensus-1 | TREP3415 |
| PTREP174 | DNA transposon, TIR, CACTA | DTC_Dario_consensus-1 | TREP3404 |
| PTREP175 | DNA transposon, TIR, CACTA | DTC_Dario_consensus-1 | TREP3404 |
| PTREP176 | DNA transposon, TIR, CACTA | DTC_DOPPIA_consensus-1 | TREP3436 |
| PTREP177 | DNA transposon, TIR, CACTA | DTC_DOPPIA_consensus-1 | TREP3436 |
| PTREP178 | DNA transposon, TIR, CACTA | DTC_Dorian_consensus-1 | TREP3422 |
| PTREP179 | DNA transposon, TIR, CACTA | DTC_Dorian_consensus-1 | TREP3422 |
| PTREP18 | DNA transposon, TIR, CACTA | DTC_Caspar_AY146588-1 | TREP775 |
| PTREP180 | DNA transposon, TIR, CACTA | DTC_En1_consensus-1 | TREP3437 |
| PTREP181 | DNA transposon, TIR, CACTA | DTC_En1_consensus-1 | TREP3437 |
| PTREP182 | DNA transposon, TIR, CACTA | DTC_Eric_consensus-1 | TREP3423 |
| PTREP183 | DNA transposon, TIR, CACTA | DTC_Eric_consensus-1 | TREP3423 |
| PTREP184 | DNA transposon, TIR, CACTA | DTC_Grover_consensus-1 | TREP3424 |
| PTREP185 | DNA transposon, TIR, CACTA | DTC_Grover_consensus-1 | TREP3424 |
| PTREP186 | DNA transposon, TIR, CACTA | DTC_Helios_consensus-1 | TREP3439 |
| PTREP187 | DNA transposon, TIR, CACTA | DTC_Horace_consensus-1 | TREP3408 |
| PTREP188 | DNA transposon, TIR, CACTA | DTC_Isaac_consensus-1 | TREP3417 |
| PTREP189 | DNA transposon, TIR, CACTA | DTC_Isaac_consensus-1 | TREP3417 |
| PTREP190 | DNA transposon, TIR, CACTA | DTC_Isidor_consensus-1 | TREP3425 |
| PTREP191 | DNA transposon, TIR, CACTA | DTC_Isidor_consensus-1 | TREP3425 |
| PTREP192 | DNA transposon, TIR, CACTA | DTC_Ivan_consensus-1 | TREP3440 |
| PTREP193 | DNA transposon, TIR, CACTA | DTC_Ivan_consensus-1 | TREP3440 |
| PTREP194 | DNA transposon, TIR, CACTA | DTC_Janus_consensus-1 | TREP3426 |
| PTREP195 | DNA transposon, TIR, CACTA | DTC_Janus_consensus-1 | TREP3426 |
| PTREP196 | DNA transposon, TIR, CACTA | DTC_Joey_consensus-1 | TREP3441 |
| PTREP197 | DNA transposon, TIR, CACTA | DTC_Joey_consensus-1 | TREP3441 |
| PTREP198 | DNA transposon, TIR, CACTA | DTC_Korbin_consensus-1 | TREP3411 |
| PTREP199 | DNA transposon, TIR, CACTA | DTC_Korbin_consensus-1 | TREP3411 |
| PTREP20 | DNA transposon, TIR, CACTA | DTC_Caspar_TREP788-1 | TREP788 |
| PTREP200 | DNA transposon, TIR, CACTA | DTC_Norman_consensus-1 | TREP3442 |
| PTREP201 | DNA transposon, TIR, CACTA | DTC_Norman_consensus-1 | TREP3442 |
| PTREP202 | DNA transposon, TIR, CACTA | DTC_Oswald_consensus-1 | TREP3443 |
| PTREP203 | DNA transposon, TIR, CACTA | DTC_Oswald_consensus-1 | TREP3443 |
| PTREP204 | DNA transposon, TIR, CACTA | DTC_Preston_consensus-1 | TREP3444 |
| PTREP205 | DNA transposon, TIR, CACTA | DTC_Radon_124-1 | - |
| PTREP206 | DNA transposon, TIR, CACTA | DTC_Radon_consensus-1 | TREP3427 |
| PTREP207 | DNA transposon, TIR, CACTA | DTC_Radon_consensus-1 | TREP3427 |
| PTREP208 | DNA transposon, TIR, CACTA | DTC_Rufus_consensus-1 | TREP3428 |
| PTREP209 | DNA transposon, TIR, CACTA | DTC_Rufus_consensus-1 | TREP3428 |
| PTREP210 | DNA transposon, TIR, CACTA | DTC_Sandro_consensus-1 | TREP3429 |
| PTREP211 | DNA transposon, TIR, CACTA | DTC_Seamus_consensus-1 | TREP3430 |
| PTREP212 | DNA transposon, TIR, CACTA | DTC_Seamus_consensus-1 | TREP3430 |
| PTREP213 | DNA transposon, TIR, CACTA | DTC_Sherman_consensus-1 | TREP3431 |
| PTREP214 | DNA transposon, TIR, CACTA | DTC_Sherman_consensus-1 | TREP3431 |
| PTREP215 | DNA transposon, TIR, CACTA | DTC_Storm_consensus-1 | TREP3432 |
| PTREP216 | DNA transposon, TIR, CACTA | DTC_Storm_consensus-1 | TREP3432 |
| PTREP217 | DNA transposon, TIR, Harbinger | DTC_Donald_consensus-1 | TREP3016 |
| PTREP218 | DNA transposon, TIR, Harbinger | DTH_Kong_consensus-1 | TREP3040 |
| PTREP219 | DNA transposon, TIR, Harbinger | DTH_OsKong_consensus-1 | - |
| PTREP22 | DNA transposon, TIR, CACTA | DTC_Clifford_AY146588-1 | TREP774 |
| PTREP220 | DNA transposon, TIR, Harbinger | DTH_Pong_BK000586-1 | TREP3312 |
| PTREP221 | DNA transposon, TIR, Harbinger | DTH_Pong_BK000586-1 | TREP3312 |
| PTREP222 | DNA transposon, TIR, Harbinger | DTH_Rong_consensus-1 | - |
| PTREP223 | DNA transposon, TIR, Mutator | DTM_Pilifon_AY485644-1 | TREP3449 |
| PTREP224 | DNA transposon, unknown, unknown | DXX_Xitos_42j2-1 | TREP3316 |
| PTREP225 | Retrotransposon, LINE, unknown | RIX_Karin_consensus-1 | TREP3454 |
| PTREP226 | Retrotransposon, LINE, unknown | RIX_Karin_consensus-1 | TREP3454 |
| PTREP227 | Retrotransposon, LTR, Copia | RLC_BARE1_B_consensus-1 | TREP3133 |
| PTREP228 | Retrotransposon, LTR, Copia | RLC_BARE1_C_consensus-1 | TREP3134 |
| PTREP229 | Retrotransposon, LTR, Copia | RLC_Daniela_10k23-1 | TREP3329 |
| PTREP23 | DNA transposon, TIR, CACTA | DTC_Caspar_TREP788-1 | TREP788 |
| PTREP230 | Retrotransposon, LTR, Copia | RLC_Eugene_consensus-1 | TREP3147 |
| PTREP231 | Retrotransposon, LTR, Copia | RLG_Fatima_B_consensus-1 | TREP3198 |
| PTREP232 | Retrotransposon, LTR, Copia | RLG_Fatima_B_consensus-1 | TREP3198 |
| PTREP233 | Retrotransposon, LTR, Copia | RLG_Fatima_consensus-1 | TREP3189 |
| PTREP234 | Retrotransposon, LTR, Copia | RLG_Fatima_consensus-1 | TREP3189 |
| PTREP235 | Retrotransposon, LTR, Copia | RLC_Maximus_consensus-1 | TREP3153 |
| PTREP236 | Retrotransposon, LTR, Copia | RLC_Maximus_consensus-1 | TREP3153 |
| PTREP237 | Retrotransposon, LTR, Copia | RLC_Maximus_consensus-1 | TREP3153 |
| PTREP238 | Retrotransposon, LTR, Copia | RLC_Olivia_42j2-1 | TREP3154 |
| PTREP239 | Retrotransposon, LTR, Copia | RLC_WIS_B_consensus-1 | TREP3161 |
| PTREP24 | DNA transposon, TIR, CACTA | DTC_Caspar_AY146588-1 | TREP775 |
| PTREP240 | Retrotransposon, LTR, Gypsy | RLG_AF222021-1 | TREP69 |
| PTREP241 | Retrotransposon, LTR, Gypsy | RLG_BAGY2_consensus-1 | TREP3162 |
| PTREP242 | Retrotransposon, LTR, Gypsy | RLG_Carmilla_consensus-1 | TREP3169 |
| PTREP243 | Retrotransposon, LTR, Gypsy | RLG_Carmilla_consensus-1 | TREP3169 |
| PTREP244 | Retrotransposon, LTR, Gypsy | RLG_Erika_consensus-1 | TREP3178 |
| PTREP245 | Retrotransposon, LTR, Gypsy | RLG_Fatima_consensus-1 | TREP3189 |
| PTREP246 | Retrotransposon, LTR, Gypsy | RLG_Geneva_cons_consensus-1 | - |
| PTREP247 | Retrotransposon, LTR, Gypsy | RLG_Haight_consensus-1 | - |
| PTREP248 | Retrotransposon, LTR, Gypsy | RLG_Jeli_consensus-1 | TREP3458 |
| PTREP249 | Retrotransposon, LTR, Gypsy | RLG_Latidu_10k23-1 | TREP3203 |
| PTREP25 | DNA transposon, TIR, CACTA | DTC_Clifford_TREP770-1 | TREP770 |
| PTREP250 | Retrotransposon, LTR, Gypsy | RLG_Laura_consensus-1 | TREP3209 |
| PTREP251 | Retrotransposon, LTR, Gypsy | RLG_Nusif_103H9-2 | TREP2317 |
| PTREP252 | Retrotransposon, LTR, Gypsy | RLG_Nusif_10k23-1 | TREP3215 |
| PTREP253 | Retrotransposon, LTR, Gypsy | RLG_OsTaz_consensus-1 | TREP3220 |
| PTREP254 | Retrotransposon, LTR, Gypsy | RLG_Sabrina_consensus-1 | TREP3239 |
| PTREP255 | Retrotransposon, LTR, Gypsy | RLG_WHAM_consensus-1 | TREP3269 |
| PTREP256 | DNA transposon, TIR, Mariner | DTT_Mercia_DQ885768-1 | TREP3513 |
| PTREP27 | DNA transposon, TIR, CACTA | DTC_Balduin_AY146588-1 | TREP773 |
| PTREP28 | DNA transposon, TIR, CACTA | DTC_Isaac_AY146587-1 | TREP782 |
| PTREP29 | DNA transposon, TIR, CACTA | DTC_Donald_AF427791-1 | TREP748 |
| PTREP3 | Retrotransposon, LTR, Copia | RLC_Usier_AF474982-1 | TREP704 |
| PTREP30 | DNA transposon, TIR, CACTA | DTC_Donald_AF474373-1 | TREP750 |
| PTREP32 | DNA transposon, TIR, CACTA | DTC_TAT1_AF325196-1 | TREP767 |
| PTREP34 | Retrotransposon, LTR, Gypsy | RLG_Sukkula_AF427791-1 | TREP740 |
| PTREP35 | DNA transposon, TIR, Mutator | DTM_HORMU_AF427791-1 | TREP731 |
| PTREP36 | Retrotransposon, LTR, Copia | RLC_HORPIA2_AF427791-1 | TREP730 |
| PTREP37 | DNA transposon, TIR, HAT | DTA_AF427791-1 | TREP718 |
| PTREP39 | Retrotransposon, LTR, Gypsy | RLG_BAGY2_AF427791-1 | TREP720 |
| PTREP44 | Retrotransposon, LINE, unknown | RIX_Karin_AY146588-1 | TREP800 |
| PTREP44 | Retrotransposon, LINE, unknown | RIX_Karin_AY146588-3 | TREP802 |
| PTREP47 | Retrotransposon, LTR, Gypsy | RLG_WHAM_AY146588-1 | TREP817 |
| PTREP49 | Retrotransposon, LTR, Gypsy | RLG_Wilma_AY146588-3 | TREP821 |
| PTREP51 | Retrotransposon, LTR, Copia | RLC_Bianca_AF521177-1 | TREP1161 |
| PTREP52 | Retrotransposon, LTR, Copia | RLC_HORPIA2_AF521177-1 | TREP1162 |
| PTREP55 | DNA transposon, TIR, CACTA | DTC_AJ406396-1 | TREP11 |
| PTREP56 | DNA transposon, TIR, HAT | DXX_George_AF521177-1 | TREP1169 |
| PTREP57 | Retrotransposon, LINE, unknown | RIX_AY013246-1 | TREP20 |
| PTREP58 | Retrotransposon, LTR, Copia | RLC_Ikeros_AY013246-1 | TREP21 |
| PTREP59 | Retrotransposon, LTR, Copia | RLC_Inav_AY013246-1 | TREP22 |
| PTREP60 | Retrotransposon, LTR, Gypsy | RLG_Erika_AF326781-1 | TREP234 |
| PTREP61 | Retrotransposon, LTR, Gypsy | RLG_Fatima_B_AF326781-1 | TREP235 |
| PTREP62 | Retrotransposon, LINE, unknown | RIX_Isabelle_AF326781-1 | TREP238 |
| PTREP63 | Retrotransposon, LTR, Gypsy | RLG_Cereba_AY040832-1 | TREP98 |
| PTREP64 | Retrotransposon, LTR, Gypsy | RLG_Cereba_AY040832-2 | TREP99 |
| PTREP65 | Retrotransposon, LTR, Copia | RLC_Barbara_AF326781-1 | TREP228 |
| PTREP66 | Retrotransposon, LTR, Copia | RLC_Barbara_AF326781-1 | TREP228 |
| PTREP67 | Retrotransposon, LTR, Gypsy | RLG_Daniela_AF326781-1 | TREP231 |
| PTREP68 | Retrotransposon, LTR, Gypsy | RLG_Daniela_AF326781-1 | TREP231 |
| PTREP69 | Retrotransposon, LTR, Gypsy | RLG_Daniela_AF326781-1 | TREP231 |
| PTREP70 | Retrotransposon, LINE, unknown | RIX_Yvonne_AY146588-1 | TREP824 |
| PTREP71 | DNA transposon, TIR, CACTA | DTC_Balduin_AY146588-2 | TREP797 |
| PTREP72 | DNA transposon, TIR, CACTA | DTC_Donald_AF474373-2 | TREP751 |
| PTREP74 | Retrotransposon, LTR, Copia | RLC_Angela_609E6-3 | TREP1222 |
| PTREP75 | Retrotransposon, LTR, Gypsy | RLG_Danae_231A16-1 | TREP1226 |
| PTREP76 | Retrotransposon, LTR, Gypsy | RLG_Erika_231A16-2 | TREP1228 |
| PTREP77 | Retrotransposon, LTR, Gypsy | RLG_Fatima_231A16-1 | TREP3183 |
| PTREP78 | Retrotransposon, LTR, Gypsy | RLG_Fatima_B_609E6-1 | TREP1231 |
| PTREP79 | Retrotransposon, LTR, Gypsy | RLG_Laura_719C13-1 | TREP1238 |
| PTREP8 | Retrotransposon, LTR, Copia | RLC_Angela_AY146587-1 | TREP826 |
| PTREP80 | DNA transposon, TIR, CACTA | DTC_TAT1_231A16-1 | TREP1241 |
| PTREP81 | Retrotransposon, LTR, Gypsy | RLG_WHAM_231A16-1 | TREP1243 |
| PTREP82 | Retrotransposon, LTR, Gypsy | RLG_Romani_AY188331-1 | TREP1242 |
| PTREP83 | DNA transposon, TIR, CACTA | DTC_Balduin_AY146588-1 | TREP773 |
| PTREP84 | Retrotransposon, LTR, Copia | RLC_Ale_AF459088-1 | TREP1307 |
| PTREP85 | Retrotransposon, LTR, Gypsy | RLG_Jeli_AF459088-2 | TREP1309 |
| PTREP86 | Retrotransposon, LTR, Copia | RLC_TAR1_AF459088-2 | TREP1317 |
| PTREP89 | Retrotransposon, LTR, Gypsy | RLG_Erika_AF459088-1 | TREP1305 |
| PTREP92 | Retrotransposon, LTR, Copia | RLC_Elena_AY661558-1 | TREP1521 |
| PTREP93 | DNA transposon, TIR, Mutator | DTM_HORMU_AY661558-1 | TREP1523 |
| PTREP94 | Retrotransposon, LTR, Copia | RLC_HORPIA_AY661558-1 | TREP1524 |
| PTREP95 | Retrotransposon, LTR, Copia | RLC_Inga_AY661558-2 | TREP1527 |
| PTREP96 | Retrotransposon, LTR, Gypsy | RLG_Jeli_AY661558-1 | TREP1529 |
| PTREP97 | Retrotransposon, LTR, Gypsy | RLG_Laura_AY661558-1 | TREP1534 |
| PTREP98 | Retrotransposon, LTR, Copia | RLC_Rada_AY661558-1 | TREP1536 |
| PTREP99 | Retrotransposon, LTR, Gypsy | RLG_Sukkula_AY661558-7 | TREP1556 |