| total TREP
| |
|
|
|
|
|
|
| DNA transposons |
|
| Accession |
Classification |
Family name |
Size |
Comment |
Organism |
Submitted by |
| TREP3300
| DNA transposon, Helitron, Helitron |
DHH_Hector_AY642926-1 |
23270 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3000
| DNA transposon, Helitron, Helitron |
DHH_Helios_42j2-1 |
4520 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3001
| DNA transposon, Helitron, Helitron |
DHH_Helios_AF521177-1 |
22223 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3301
| DNA transposon, Helitron, Helitron |
DHH_Paddington_consensus-1 |
17472 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3302
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-101 |
16457 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3303
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-102 |
17565 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3304
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-103 |
17532 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3305
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-104 |
13901 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3306
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-105 |
13231 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3307
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-106 |
16539 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3308
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-107 |
17813 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3002
| DNA transposon, TIR, HAT |
DTA_Aurec_58l25-1 |
4214 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3003
| DNA transposon, TIR, HAT |
DTA_Harper_M801L24-1 |
4557 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP718
| DNA transposon, TIR, HAT |
DTA_unnamed_AF427791-1 |
710 |
putative, fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP3435
| DNA transposon, TIR, CACTA |
DTC_Alfred_consensus-1 |
8351 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3400
| DNA transposon, TIR, CACTA |
DTC_Aron_B_consensus-1 |
8556 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3401
| DNA transposon, TIR, CACTA |
DTC_Aron_consensus-1 |
8721 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP773
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY146588-1 |
9841 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP797
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY146588-2 |
4729 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP2063
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY853252-1 |
10037 |
3' truncated |
Hordeum vulgare |
Marion Roeder |
| TREP760
| DNA transposon, TIR, CACTA |
DTC_Balduin_BJ218039-1 |
554 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP755
| DNA transposon, TIR, CACTA |
DTC_Balduin_BQ469151-1 |
376 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP756
| DNA transposon, TIR, CACTA |
DTC_Balduin_BQ661452-1 |
376 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3412
| DNA transposon, TIR, CACTA |
DTC_Balduin_consensus-1 |
11744 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP124
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-1 |
9600 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP125
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-2 |
11734 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP126
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-3 |
10132 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3418
| DNA transposon, TIR, CACTA |
DTC_Baldur_consensus-1 |
8955 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3402
| DNA transposon, TIR, CACTA |
DTC_Baron_consensus-1 |
8479 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3419
| DNA transposon, TIR, CACTA |
DTC_Benito_consensus-1 |
4256 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3004
| DNA transposon, TIR, CACTA |
DTC_Boris_42j2-2 |
14742 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2222
| DNA transposon, TIR, CACTA |
DTC_Boris_464G14-2 |
4242 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3005
| DNA transposon, TIR, CACTA |
DTC_Boris_59e04-1 |
8015 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3006
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-1 |
4691 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3007
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-2 |
2841 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3008
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-3 |
4260 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP781
| DNA transposon, TIR, CACTA |
DTC_Byron_AY146587-2 |
5096 |
complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3420
| DNA transposon, TIR, CACTA |
DTC_Calvin_consensus-1 |
10759 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3510
| DNA transposon, TIR, CACTA |
DTC_Cameron_DQ885753-1 |
1218 |
complete element |
Triticeae |
David Laurie |
| TREP3421
| DNA transposon, TIR, CACTA |
DTC_Carson_consensus-1 |
1282 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP1704
| DNA transposon, TIR, CACTA |
DTC_Caspar_1020F19-1 |
12029 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP2248
| DNA transposon, TIR, CACTA |
DTC_Caspar_103H9-1 |
1300 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP1225
| DNA transposon, TIR, CACTA |
DTC_Caspar_231A16-1 |
7044 |
complete element |
Triticum monococcum |
|
| TREP3010
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-1 |
1279 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3009
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-12 |
11342 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3011
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-6 |
2260 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2204
| DNA transposon, TIR, CACTA |
DTC_Caspar_464G14-2 |
559 |
3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2206
| DNA transposon, TIR, CACTA |
DTC_Caspar_464G14-4 |
134 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3012
| DNA transposon, TIR, CACTA |
DTC_Caspar_59e04-2 |
6092 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP772
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF325197-1 |
1483 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP1303
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF459088-2 |
11707 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1304
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF459088-3 |
11359 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP787
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF521177-1 |
9105 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP758
| DNA transposon, TIR, CACTA |
DTC_Caspar_AL816166-1 |
284 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP759
| DNA transposon, TIR, CACTA |
DTC_Caspar_AL816390-1 |
341 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP775
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY146588-1 |
9913 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1636
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY643844-2 |
12091 |
complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1511
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-1 |
11430 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1509
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-10 |
387 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1512
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-2 |
4539 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1514
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-4 |
11435 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1515
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-5 |
11633 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1516
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-6 |
9360 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1517
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-7 |
5100 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1518
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-8 |
2498 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2004
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-1 |
3849 |
3' end |
Hordeum vulgare |
Marion Roeder |
| TREP2007
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-4 |
321 |
5' end |
Hordeum vulgare |
Marion Roeder |
| TREP2008
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-5 |
844 |
5'fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2009
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-6 |
848 |
5'fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3413
| DNA transposon, TIR, CACTA |
DTC_Caspar_consensus-1 |
11568 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2246
| DNA transposon, TIR, CACTA |
DTC_Caspar_EF067844-5 |
995 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP788
| DNA transposon, TIR, CACTA |
DTC_Caspar_TREP788-1 |
11627 |
complete element |
Hordeum vulgare |
|
| TREP3403
| DNA transposon, TIR, CACTA |
DTC_Chester_consensus-1 |
8216 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP2250
| DNA transposon, TIR, CACTA |
DTC_Clifford_103H9-3 |
284 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP1801
| DNA transposon, TIR, CACTA |
DTC_Clifford_294D11-1 |
11475 |
5'fragment |
Triticum durum |
Thomas Wicker |
| TREP1802
| DNA transposon, TIR, CACTA |
DTC_Clifford_294D11-2 |
12732 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3013
| DNA transposon, TIR, CACTA |
DTC_Clifford_42j2-7 |
3429 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3014
| DNA transposon, TIR, CACTA |
DTC_Clifford_59e04-1 |
7662 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3015
| DNA transposon, TIR, CACTA |
DTC_Clifford_59e04-3 |
2900 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP774
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY146588-1 |
12637 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP776
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY146588-1 |
12664 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2065
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-12 |
11370 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2066
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-13 |
1804 |
3' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2067
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-14 |
2654 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3414
| DNA transposon, TIR, CACTA |
DTC_Clifford_consensus-1 |
11318 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2244
| DNA transposon, TIR, CACTA |
DTC_Clifford_EF067844-3 |
2767 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP770
| DNA transposon, TIR, CACTA |
DTC_Clifford_TREP770-1 |
8334 |
Ends are truncated |
Triticum tauschii |
|
| TREP771
| DNA transposon, TIR, CACTA |
DTC_Clifford_TREP771-1 |
3296 |
fragment of 3' region |
Triticum tauschii |
|
| TREP752
| DNA transposon, TIR, CACTA |
DTC_Clifford_X63357-1 |
569 |
fragment of 3' region |
Hordeum vulgare |
Thomas Wicker |
| TREP3415
| DNA transposon, TIR, CACTA |
DTC_Conan_consensus-1 |
11735 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2069
| DNA transposon, TIR, CACTA |
DTC_Dagobert_AY853252-1 |
7864 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3404
| DNA transposon, TIR, CACTA |
DTC_Dario_consensus-1 |
8969 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP748
| DNA transposon, TIR, CACTA |
DTC_Donald_AF427791-1 |
12590 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP749
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474072-1 |
10540 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP750
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474373-1 |
12446 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP751
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474373-2 |
7376 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1510
| DNA transposon, TIR, CACTA |
DTC_Donald_AY661558-11 |
10878 |
3' fragment 14 bp truncated? |
Hordeum vulgare |
Thomas Wicker |
| TREP1513
| DNA transposon, TIR, CACTA |
DTC_Donald_AY661558-3 |
9497 |
3'fragment, 14 bp truncated? |
Hordeum vulgare |
Thomas Wicker |
| TREP2064
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-11 |
8296 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2055
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-15 |
3200 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2005
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-2 |
11944 |
complete element (no TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2006
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-3 |
7220 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2010
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-7 |
2861 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2011
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-8 |
2453 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3016
| DNA transposon, TIR, CACTA |
DTC_Donald_consensus-1 |
14374 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3017
| DNA transposon, TIR, CACTA |
DTC_Donald_M801L24-1 |
10485 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3436
| DNA transposon, TIR, CACTA |
DTC_DOPPIA_consensus-1 |
9537 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3422
| DNA transposon, TIR, CACTA |
DTC_Dorian_consensus-1 |
9874 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP2247
| DNA transposon, TIR, CACTA |
DTC_Eddy_EF067844-6 |
997 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP769
| DNA transposon, TIR, CACTA |
DTC_Eddy_Z66528-1 |
331 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3405
| DNA transposon, TIR, CACTA |
DTC_Eloy_consensus-1 |
4234 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3437
| DNA transposon, TIR, CACTA |
DTC_En1_consensus-1 |
8287 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP778
| DNA transposon, TIR, CACTA |
DTC_Enac_AY146588-1 |
11361 |
non-autonomous, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP777
| DNA transposon, TIR, CACTA |
DTC_Enac_AY146588-2 |
11397 |
non-autonomous, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP3438
| DNA transposon, TIR, CACTA |
DTC_Eric_B_consensus-1 |
7926 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3423
| DNA transposon, TIR, CACTA |
DTC_Eric_consensus-1 |
10606 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3018
| DNA transposon, TIR, CACTA |
DTC_Fergat_103H9-1 |
2874 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3019
| DNA transposon, TIR, CACTA |
DTC_Fergat_42j2-4 |
2371 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2242
| DNA transposon, TIR, CACTA |
DTC_Francis_EF067844-1 |
5202 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3407
| DNA transposon, TIR, CACTA |
DTC_Garth_B_consensus-1 |
6968 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3406
| DNA transposon, TIR, CACTA |
DTC_Garth_consensus-1 |
1746 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1519
| DNA transposon, TIR, CACTA |
DTC_Gaston_AY661558-9 |
2344 |
complete non-autonomous element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2068
| DNA transposon, TIR, CACTA |
DTC_Gaston_AY853252-9 |
2715 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2243
| DNA transposon, TIR, CACTA |
DTC_Gaston_EF067844-2 |
1792 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3020
| DNA transposon, TIR, CACTA |
DTC_Gaston_M801L24-1 |
1723 |
complete element, non-autonomous |
Hordeum vulgare |
Thomas Wicker |
| TREP3424
| DNA transposon, TIR, CACTA |
DTC_Grover_consensus-1 |
11420 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3021
| DNA transposon, TIR, CACTA |
DTC_Hamlet_10k23-1 |
1238 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP1803
| DNA transposon, TIR, CACTA |
DTC_Hamlet_294D11-3 |
1431 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3022
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-1 |
1044 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3023
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-2 |
717 |
5'fragment, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3024
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-5 |
938 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP2205
| DNA transposon, TIR, CACTA |
DTC_Hamlet_464G14-3 |
1402 |
complete element (3 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2207
| DNA transposon, TIR, CACTA |
DTC_Hamlet_464G14-5 |
859 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP763
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF234649-2 |
750 |
SNAC, complete element, (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP764
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF325198-1 |
1530 |
SNAC complete element, (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1302
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF459088-1 |
1350 |
SNAC, complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP784
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146587-1 |
1305 |
SNAC, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP785
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146587-3 |
807 |
3' truncated |
Triticum durum |
Thomas Wicker |
| TREP780
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146588-2 |
1371 |
SNAC, complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP753
| DNA transposon, TIR, CACTA |
DTC_Hamlet_BF618436-1 |
143 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3416
| DNA transposon, TIR, CACTA |
DTC_Hamlet_consensus-1 |
1385 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3439
| DNA transposon, TIR, CACTA |
DTC_Helios_consensus-1 |
12259 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP2249
| DNA transposon, TIR, CACTA |
DTC_Heyjude_103H9-2 |
3772 |
complete element, hybrid with Jude |
Triticum durum |
Thomas Wicker |
| TREP3025
| DNA transposon, TIR, CACTA |
DTC_Heyjude_42j2-2 |
3759 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3408
| DNA transposon, TIR, CACTA |
DTC_Horace_consensus-1 |
7985 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3409
| DNA transposon, TIR, CACTA |
DTC_Irvin_consensus-1 |
4799 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1710
| DNA transposon, TIR, CACTA |
DTC_Isaac_1020F19-1 |
5198 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1811
| DNA transposon, TIR, CACTA |
DTC_Isaac_294D11-1 |
17960 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1812
| DNA transposon, TIR, CACTA |
DTC_Isaac_294D11-3 |
10200 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP782
| DNA transposon, TIR, CACTA |
DTC_Isaac_AY146587-1 |
13135 |
complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3417
| DNA transposon, TIR, CACTA |
DTC_Isaac_consensus-1 |
21226 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3425
| DNA transposon, TIR, CACTA |
DTC_Isidor_consensus-1 |
11265 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3440
| DNA transposon, TIR, CACTA |
DTC_Ivan_consensus-1 |
11135 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP2245
| DNA transposon, TIR, CACTA |
DTC_Ivan_EF067844-4 |
1080 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3426
| DNA transposon, TIR, CACTA |
DTC_Janus_consensus-1 |
13126 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3410
| DNA transposon, TIR, CACTA |
DTC_Jeffrey_consensus-1 |
4282 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3441
| DNA transposon, TIR, CACTA |
DTC_Joey_consensus-1 |
12258 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP766
| DNA transposon, TIR, CACTA |
DTC_Jorge_231A16-1 |
14733 |
complete element, (3 bp TSD) |
Triticum monococcum |
|
| TREP1813
| DNA transposon, TIR, CACTA |
DTC_Jorge_294D11-1 |
3803 |
5'fragment |
Triticum durum |
Thomas Wicker |
| TREP3026
| DNA transposon, TIR, CACTA |
DTC_Jorge_59e04-1 |
27219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP765
| DNA transposon, TIR, CACTA |
DTC_Jorge_AF326781-1 |
15807 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1322
| DNA transposon, TIR, CACTA |
DTC_Jorge_AF459088-1 |
4215 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1234
| DNA transposon, TIR, CACTA |
DTC_Jorge_AY188331-2 |
1821 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1245
| DNA transposon, TIR, CACTA |
DTC_Jorge_AY188332-1 |
211 |
putative complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3027
| DNA transposon, TIR, CACTA |
DTC_Jude_42j2-13 |
1219 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3028
| DNA transposon, TIR, CACTA |
DTC_Jude_42j2-9 |
1855 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP28
| DNA transposon, TIR, CACTA |
DTC_Jude_464G14-1 |
2986 |
complete? |
Triticum aestivum |
Silvie Cloutier |
| TREP1248
| DNA transposon, TIR, CACTA |
DTC_Jude_AF325196-1 |
1363 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP747
| DNA transposon, TIR, CACTA |
DTC_Jude_AF446141-1 |
6255 |
complete element, (3 bp TSD) |
Aegilops tauschii |
Thomas Wicker |
| TREP3029
| DNA transposon, TIR, CACTA |
DTC_Kane_EF540321-1 |
1579 |
complete element, non-autonomous |
Triticum turgidum |
Jorge Dubcovsky |
| TREP3411
| DNA transposon, TIR, CACTA |
DTC_Korbin_consensus-1 |
8253 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1717
| DNA transposon, TIR, CACTA |
DTC_Mandrake_1020F19-1 |
1930 |
3' end |
Triticum aestivum |
Thomas Wicker |
| TREP3030
| DNA transposon, TIR, CACTA |
DTC_Mandrake_42j2-1 |
3299 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP757
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AF234649-1 |
1119 |
SNAC, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP746
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AF446141-1 |
3411 |
complete element, (3 bp TSD) |
Aegilops tauschii |
Thomas Wicker |
| TREP783
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY146587-1 |
930 |
SNAC, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP779
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY146588-1 |
898 |
SNAC, complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2018
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY853252-1 |
2896 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2019
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY853252-2 |
1200 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP754
| DNA transposon, TIR, CACTA |
DTC_Mandrake_BG309793-1 |
736 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP2308
| DNA transposon, TIR, CACTA |
DTC_Manor_EF067844-1 |
7035 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2309
| DNA transposon, TIR, CACTA |
DTC_Manor_EF067844-2 |
4153 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2023
| DNA transposon, TIR, CACTA |
DTC_Nico_AY853252-1 |
9779 |
degenerated CDS |
Hordeum vulgare |
Marion Roeder |
| TREP3442
| DNA transposon, TIR, CACTA |
DTC_Norman_consensus-1 |
10413 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3443
| DNA transposon, TIR, CACTA |
DTC_Oswald_consensus-1 |
10971 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3309
| DNA transposon, TIR, CACTA |
DTC_Pavel_AY188332-1 |
5946 |
5'fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3444
| DNA transposon, TIR, CACTA |
DTC_Preston_consensus-1 |
18869 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3427
| DNA transposon, TIR, CACTA |
DTC_Radon_consensus-1 |
11607 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3428
| DNA transposon, TIR, CACTA |
DTC_Rufus_consensus-1 |
11216 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3429
| DNA transposon, TIR, CACTA |
DTC_Sandro_consensus-1 |
11931 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3430
| DNA transposon, TIR, CACTA |
DTC_Seamus_consensus-1 |
8871 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3031
| DNA transposon, TIR, CACTA |
DTC_Sherlock_42j2-1 |
1645 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1540
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-1 |
224 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1541
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-2 |
9890 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1542
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-3 |
9243 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1543
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-4 |
9497 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1544
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-5 |
9651 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1545
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-6 |
631 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1546
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-7 |
1633 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1547
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-8 |
89 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2089
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY853252-2 |
315 |
3'end |
Hordeum vulgare |
Marion Roeder |
| TREP3433
| DNA transposon, TIR, CACTA |
DTC_Sherlock_consensus-1 |
9517 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3431
| DNA transposon, TIR, CACTA |
DTC_Sherman_consensus-1 |
13123 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3432
| DNA transposon, TIR, CACTA |
DTC_Storm_consensus-1 |
12603 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP767
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF325196-1 |
5828 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP768
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF427791-1 |
7849 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1318
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF459088-1 |
14576 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1203
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492368-1 |
271 |
fragment |
Aegilops tauschii |
Thomas Wicker |
| TREP1204
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492370-1 |
271 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1205
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492371-1 |
271 |
fragment |
Aegilops tauschii |
Thomas Wicker |
| TREP1206
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492372-1 |
271 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1207
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492373-1 |
271 |
fragment |
Triticum urartu |
Thomas Wicker |
| TREP1208
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492374-1 |
271 |
fragment |
Triticum monococcum |
Thomas Wicker |
| TREP1209
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492375-1 |
271 |
fragment |
Secale cereale |
Thomas Wicker |
| TREP1210
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492376-1 |
271 |
fragment |
Secale cereale |
Thomas Wicker |
| TREP1211
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492377-1 |
271 |
fragment |
Aegilops speltoides |
Thomas Wicker |
| TREP1212
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492383-1 |
271 |
fragment |
Hordeum vulgare |
Ruslan Kalendar |
| TREP761
| DNA transposon, TIR, CACTA |
DTC_TAT1_BJ247168-1 |
414 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP762
| DNA transposon, TIR, CACTA |
DTC_TAT1_BJ253225-1 |
514 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP1241
| DNA transposon, TIR, CACTA |
DTC_TAT2_231A16-1 |
4506 |
complete element |
Triticum monococcum |
|
| TREP786
| DNA transposon, TIR, CACTA |
DTC_TAT2_AY146587-1 |
3158 |
5' truncated |
Triticum durum |
Thomas Wicker |
| TREP1478
| DNA transposon, TIR, CACTA |
DTC_TAT2_AY494981-1 |
4015 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP2041
| DNA transposon, TIR, CACTA |
DTC_TAT3_AY853252-1 |
5267 |
complete element? |
Hordeum vulgare |
Marion Roeder |
| TREP1477
| DNA transposon, TIR, CACTA |
DTC_TAT4_AY368673-1 |
1917 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP2221
| DNA transposon, TIR, CACTA |
DTC_TAT5_464G14-1 |
1156 |
complete element (3 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP11
| DNA transposon, TIR, CACTA |
DTC_unnamed_AJ406396-1 |
640 |
fragment of transposase |
Triticum aestivum |
GenBank |
| TREP1635
| DNA transposon, TIR, CACTA |
DTC_unnamed_AY643843-1 |
2146 |
complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2350
| DNA transposon, TIR, CACTA |
DTC_unnamed_EF067844-1 |
2424 |
fragment |
Hordeum vulgare |
Takao Komatsuda |
| TREP3032
| DNA transposon, TIR, CACTA |
DTC_Vincent_42j2-1 |
1976 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1565
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-1 |
8485 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1566
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-2 |
7337 |
3'fragment, contains foreign gene fragment Os06g02620 |
Hordeum vulgare |
Thomas Wicker |
| TREP1567
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-3 |
5874 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1568
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-4 |
7339 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1569
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-5 |
5877 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP3310
| DNA transposon, TIR, CACTA |
DTC_Vincent_B_M191K21-1 |
4916 |
complete element, contains foreign gene fragments |
Hordeum vulgare |
Thomas Wicker |
| TREP2358
| DNA transposon, TIR, CACTA |
DTC_Vincent_EF067844-1 |
5813 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3033
| DNA transposon, TIR, CACTA |
DTC_Vincent_M801L24-1 |
6389 |
complete element, contains foreign gene fragments |
Hordeum vulgare |
Thomas Wicker |
| TREP3434
| DNA transposon, TIR, CACTA |
DTC_VincentTIR_consensus-1 |
1992 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2251
| DNA transposon, TIR, Harbinger |
DTH_Coeus_643D12-1 |
273 |
Tourist MITE, complete element? |
Triticum durum |
Eduard Akhunov |
| TREP1670
| DNA transposon, TIR, Harbinger |
DTH_Islay_296827-1 |
274 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
|
| TREP2081
| DNA transposon, TIR, Harbinger |
DTH_Islay_AY853252-1 |
275 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1673
| DNA transposon, TIR, Harbinger |
DTH_Jura_466470-1 |
416 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum spontaneum |
Thomas Wicker |
| TREP1672
| DNA transposon, TIR, Harbinger |
DTH_Jura_X60292-1 |
391 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1660
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643842-1 |
279 |
Tourist MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1661
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643842-2 |
282 |
Tourist MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1662
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643844-1 |
300 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2104
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY853252-1 |
288 |
Tourist MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3445
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_consensus-1 |
285 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2355
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_EF067844-1 |
291 |
Tourist MITE, complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP1607
| DNA transposon, TIR, Harbinger |
DTH_Kong_109N23-1 |
350 |
fragment |
Triticum monococcum |
|
| TREP3311
| DNA transposon, TIR, Harbinger |
DTH_Kong_59e04-1 |
1300 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3034
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200779-1 |
2074 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3035
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200818-1 |
1758 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3036
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200849-1 |
2164 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3037
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC216558-1 |
2075 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3038
| DNA transposon, TIR, Harbinger |
DTH_Kong_AM050694-1 |
2082 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3039
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY188331-1 |
2086 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3042
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY914080-1 |
2436 |
complete element, non-autonomous |
Triticum monococcum |
Takao Komatsuda |
| TREP3043
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY914080-2 |
1818 |
complete element, non-autonomous |
Triticum monococcum |
Takao Komatsuda |
| TREP3040
| DNA transposon, TIR, Harbinger |
DTH_Kong_consensus-1 |
2119 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3041
| DNA transposon, TIR, Harbinger |
DTH_Kong_DQ767614-1 |
2148 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP1819
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_294D11-1 |
242 |
Tourist MITE, complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3446
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AC200842-1 |
278 |
complete element |
Triticeae |
Thomas Wicker |
| TREP833
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AY146587-1 |
278 |
Tourist MITE, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP834
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AY146587-2 |
278 |
Tourist MITE, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3447
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_consensus-1 |
272 |
Tourist MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3448
| DNA transposon, TIR, Harbinger |
DTH_OsKong_consensus-1 |
2589 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3044
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-101 |
2745 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3045
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-102 |
2765 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3046
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-103 |
2622 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3047
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-104 |
2734 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3048
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-105 |
1702 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3049
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-106 |
2245 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3050
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-107 |
1817 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3312
| DNA transposon, TIR, Harbinger |
DTH_Pong_BK000586-1 |
5166 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3052
| DNA transposon, TIR, Harbinger |
DTH_Rong_AY188332-1 |
1805 |
complete element, non-autonomous |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3051
| DNA transposon, TIR, Harbinger |
DTH_Rong_AY951945-1 |
2418 |
complete element |
|
Jorge Dubcovsky |
| TREP2326
| DNA transposon, TIR, Harbinger |
DTH_unnamed_AY914080-1 |
1251 |
truncated |
Triticum monococcum |
Takao Komatsuda |
| TREP213
| DNA transposon, TIR, Harbinger |
DTH_unnamed_M58753-1 |
134 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP3511
| DNA transposon, TIR, Harbinger |
DTH_Victor_DQ885757-1 |
276 |
complete element |
Triticeae |
David Laurie |
| TREP2226
| DNA transposon, TIR, Harbinger |
DTH_Xenon_464G14-1 |
310 |
Tourist MITE, complete element |
Triticum aestivum |
Silvie Cloutier |
| TREP3053
| DNA transposon, TIR, Harbinger |
DTH_Xenon_59e04-1 |
326 |
Tourist MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2371
| DNA transposon, TIR, Harbinger |
DTH_Xenon_AY914081-1 |
310 |
Tourist MITE, complete element |
Triticum monococcum |
Eduard Akhunov |
| TREP3054
| DNA transposon, TIR, Harbinger |
DTH_Zong_EF067844-1 |
2396 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2217
| DNA transposon, TIR, Mutator |
DTM_Annie_AY951945-1 |
1109 |
complete element, ESTs CA595997 and TACA712521 |
Triticum monococcum |
Jorge Dubcovsky |
| TREP795
| DNA transposon, TIR, Mutator |
DTM_Apollo_AY146588-1 |
866 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3055
| DNA transposon, TIR, Mutator |
DTM_Argo_42j2-2 |
949 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3056
| DNA transposon, TIR, Mutator |
DTM_Argo_42j2-3 |
689 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2202
| DNA transposon, TIR, Mutator |
DTM_Argo_464G14-1 |
1030 |
complete element (9 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP3057
| DNA transposon, TIR, Mutator |
DTM_Argus_42j2-1 |
342 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3058
| DNA transposon, TIR, Mutator |
DTM_Argus_AM050668-1 |
327 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP230
| DNA transposon, TIR, Mutator |
DTM_Charon_AF326781-1 |
1341 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP232
| DNA transposon, TIR, Mutator |
DTM_Deimos_AF326781-1 |
2159 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3059
| DNA transposon, TIR, Mutator |
DTM_Gabriel_M801L24-1 |
407 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2271
| DNA transposon, TIR, Mutator |
DTM_Gerald_103H9-1 |
363 |
complete element (2 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP2272
| DNA transposon, TIR, Mutator |
DTM_Gerald_AF521177-1 |
153 |
truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP2273
| DNA transposon, TIR, Mutator |
DTM_Gerald_AY485644-1 |
345 |
complete element |
Triticum monococcum |
Eduard Akhunov |
| TREP1171
| DNA transposon, TIR, Mutator |
DTM_Hermes_TREP1171-1 |
1519 |
complete element, (9 bp TSD) |
Triticum tauschii |
|
| TREP731
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-1 |
6162 |
putative complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP729
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-2 |
2230 |
fragment of 5' region |
Hordeum vulgare |
Thomas Wicker |
| TREP1247
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-3 |
1916 |
fragment of 5' region |
Hordeum vulgare |
Thomas Wicker |
| TREP1523
| DNA transposon, TIR, Mutator |
DTM_HORMU_AY661558-1 |
7204 |
complete element? (no TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2072
| DNA transposon, TIR, Mutator |
DTM_HORMU2_AY853252-1 |
8917 |
|
Hordeum vulgare |
Marion Roeder |
| TREP831
| DNA transposon, TIR, Mutator |
DTM_Joseph_AY146587-1 |
5612 |
complete element, (9 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3060
| DNA transposon, TIR, Mutator |
DTM_Murray_42j2-1 |
937 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2024
| DNA transposon, TIR, Mutator |
DTM_Oscar_AY853252-1 |
3195 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP1319
| DNA transposon, TIR, Mutator |
DTM_Pilifon_AF459088-1 |
4859 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3449
| DNA transposon, TIR, Mutator |
DTM_Pilifon_AY485644-1 |
4869 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3061
| DNA transposon, TIR, Mutator |
DTM_Remus_10k23-1 |
831 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3062
| DNA transposon, TIR, Mutator |
DTM_Remus_AC200807-1 |
819 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3063
| DNA transposon, TIR, Mutator |
DTM_Remus_AC200824-1 |
807 |
complete element |
|
Thomas Wicker |
| TREP3064
| DNA transposon, TIR, Mutator |
DTM_Remus_AC207950-1 |
820 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3065
| DNA transposon, TIR, Mutator |
DTM_Remus_AY914084-1 |
843 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP3066
| DNA transposon, TIR, Mutator |
DTM_Remus_AY914085-1 |
843 |
complete element |
|
Thomas Wicker |
| TREP3067
| DNA transposon, TIR, Mutator |
DTM_Remus_consensus-1 |
829 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3068
| DNA transposon, TIR, Mutator |
DTM_Remus_DQ767615-1 |
828 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP805
| DNA transposon, TIR, Mutator |
DTM_Rhea_AY146588-1 |
579 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1674
| DNA transposon, TIR, Mutator |
DTM_Spring_TREP1674-1 |
241 |
complete element (9 bp TSD) |
Hordeum vulgare |
|
| TREP1652
| DNA transposon, TIR, Mutator |
DTM_Troy_AY643842-1 |
331 |
complete element (9 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP3313
| DNA transposon, TIR, Mutator |
DTM_unnamed_AY268139-1 |
1063 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3503
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AF509533-1 |
483 |
complete element |
Aegilops tauschii |
Alberto Cenci |
| TREP3504
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AF509534-1 |
484 |
complete element |
Aegilops tauschii |
Alberto Cenci |
| TREP3500
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AM884195-1 |
482 |
complete element |
Triticum turgidum ssp. dicoccoides |
Alberto Cenci |
| TREP3501
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AM884196-1 |
484 |
complete element |
Triticum turgidum ssp. dicoccoides |
Alberto Cenci |
| TREP3512
| DNA transposon, TIR, Mutator |
DTM_Vacuna_consensus-1 |
464 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3502
| DNA transposon, TIR, Mutator |
DTM_Vacuna_CT009588-1 |
484 |
complete element, present in orthologous position in Triticum aestivum CT009585 |
Triticum turgidum ssp. durum |
Alberto Cenci |
| TREP3505
| DNA transposon, TIR, Mutator |
DTM_Vacuna_CW991740-1 |
515 |
complete element |
Triticum aestivum |
Alberto Cenci |
| TREP825
| DNA transposon, TIR, Mutator |
DTM_Zeus_AY146588-1 |
1401 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3069
| DNA transposon, TIR, Mariner |
DTT_Aison_42j2-1 |
190 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3070
| DNA transposon, TIR, Mariner |
DTT_Aison_AC200839-1 |
215 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3071
| DNA transposon, TIR, Mariner |
DTT_Aison_AC207943-1 |
219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3072
| DNA transposon, TIR, Mariner |
DTT_Aison_AM050668-1 |
219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3073
| DNA transposon, TIR, Mariner |
DTT_Aison_consensus-1 |
219 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP1601
| DNA transposon, TIR, Mariner |
DTT_Antonio_109N23-1 |
108 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP121
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-1 |
85 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP123
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-3 |
84 |
Stowaway MITE |
Triticum durum |
Thomas Wicker |
| TREP122
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-4 |
86 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP1609
| DNA transposon, TIR, Mariner |
DTT_Athos_109N23-1 |
84 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP3074
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-11 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3075
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-12 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3076
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-14 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3077
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-16 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3078
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-2 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3079
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-4 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3080
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-5 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP217
| DNA transposon, TIR, Mariner |
DTT_Athos_AF326781-1 |
85 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP735
| DNA transposon, TIR, Mariner |
DTT_Athos_AF427791-4 |
63 |
Stowaway MITE, putative, degenerated |
Hordeum vulgare |
Thomas Wicker |
| TREP850
| DNA transposon, TIR, Mariner |
DTT_Athos_AJ461536-1 |
115 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP851
| DNA transposon, TIR, Mariner |
DTT_Athos_AJ475374-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP852
| DNA transposon, TIR, Mariner |
DTT_Athos_AV910077-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP853
| DNA transposon, TIR, Mariner |
DTT_Athos_AV912245-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP854
| DNA transposon, TIR, Mariner |
DTT_Athos_AV929165-1 |
70 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP855
| DNA transposon, TIR, Mariner |
DTT_Athos_AV930097-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP856
| DNA transposon, TIR, Mariner |
DTT_Athos_AV931903-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP857
| DNA transposon, TIR, Mariner |
DTT_Athos_AV932798-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP858
| DNA transposon, TIR, Mariner |
DTT_Athos_AV934393-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP859
| DNA transposon, TIR, Mariner |
DTT_Athos_AV936022-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP860
| DNA transposon, TIR, Mariner |
DTT_Athos_AV937041-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP861
| DNA transposon, TIR, Mariner |
DTT_Athos_AV942238-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP862
| DNA transposon, TIR, Mariner |
DTT_Athos_AV943442-1 |
70 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP863
| DNA transposon, TIR, Mariner |
DTT_Athos_AV946465-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP864
| DNA transposon, TIR, Mariner |
DTT_Athos_AV946510-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP865
| DNA transposon, TIR, Mariner |
DTT_Athos_AV947157-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1654
| DNA transposon, TIR, Mariner |
DTT_Athos_AY643844-1 |
85 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP2000
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-1 |
85 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2001
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-2 |
73 |
Stowaway MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2002
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-3 |
73 |
Stowaway MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP866
| DNA transposon, TIR, Mariner |
DTT_Athos_BE193974-1 |
61 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP867
| DNA transposon, TIR, Mariner |
DTT_Athos_BE427704-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP868
| DNA transposon, TIR, Mariner |
DTT_Athos_BE428816-1 |
85 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP869
| DNA transposon, TIR, Mariner |
DTT_Athos_BE429642-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP870
| DNA transposon, TIR, Mariner |
DTT_Athos_BE455911-1 |
66 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP871
| DNA transposon, TIR, Mariner |
DTT_Athos_BE516055-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP872
| DNA transposon, TIR, Mariner |
DTT_Athos_BE587851-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP873
| DNA transposon, TIR, Mariner |
DTT_Athos_BE705232-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP874
| DNA transposon, TIR, Mariner |
DTT_Athos_BE705442-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP875
| DNA transposon, TIR, Mariner |
DTT_Athos_BF292198-1 |
86 |
Stowaway MITE, complete element |
Aegilops speltoides |
Thomas Wicker |
| TREP876
| DNA transposon, TIR, Mariner |
DTT_Athos_BF478657-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP877
| DNA transposon, TIR, Mariner |
DTT_Athos_BF485294-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP878
| DNA transposon, TIR, Mariner |
DTT_Athos_BG415487-1 |
68 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP879
| DNA transposon, TIR, Mariner |
DTT_Athos_BG904862-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP880
| DNA transposon, TIR, Mariner |
DTT_Athos_BG907379-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP881
| DNA transposon, TIR, Mariner |
DTT_Athos_BI957093-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP882
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ208036-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP883
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ215317-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP884
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ216808-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP885
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ226672-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP886
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ231594-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP887
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ231675-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP888
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ235496-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP889
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ239223-1 |
75 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP890
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ240728-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP891
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ242729-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP892
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ245875-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP893
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ248976-1 |
82 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP894
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ251781-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP895
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ253756-1 |
83 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP896
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ253899-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP897
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ257352-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP898
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ262934-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP899
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ265452-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP900
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ266423-1 |
87 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP901
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ267383-1 |
89 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP902
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ267884-1 |
84 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP903
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ268809-1 |
112 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP904
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ270008-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP905
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ270174-1 |
87 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP906
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ270769-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP907
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ272344-1 |
89 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP908
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ272820-1 |
84 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP909
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ275764-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP910
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ278727-1 |
84 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP911
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ282606-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP912
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ282680-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP913
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ283779-1 |
84 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP914
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ295756-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP915
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ300181-1 |
83 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP916
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ308502-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP917
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ312270-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP918
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ314217-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP919
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ314387-1 |
74 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP920
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ317758-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP921
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ318456-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP922
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ319687-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP923
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ319864-1 |
74 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP924
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ320318-1 |
83 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP925
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ322659-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP926
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ447578-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP927
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ455329-1 |
83 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP928
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ469610-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP929
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ471737-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP930
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ473422-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP931
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ473686-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP932
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ474373-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP933
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ474456-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP934
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ475603-1 |
83 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP935
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ483168-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP936
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ484977-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP937
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ485231-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP938
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ486785-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP939
| DNA transposon, TIR, Mariner |
DTT_Athos_BM097988-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP940
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ166569-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP941
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ170600-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP942
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ170773-1 |
75 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP943
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ171860-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP944
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ237892-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP945
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ237970-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP946
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ238527-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP947
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ472829-1 |
84 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP948
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ483026-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP949
| DNA transposon, TIR, Mariner |
DTT_Athos_BQ487424-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3081
| DNA transposon, TIR, Mariner |
DTT_Athos_consensus-1 |
85 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP118
| DNA transposon, TIR, Mariner |
DTT_Athos_EF067844-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP119
| DNA transposon, TIR, Mariner |
DTT_Athos_EF067844-2 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP120
| DNA transposon, TIR, Mariner |
DTT_Athos_EF067844-3 |
43 |
Stowaway MITE, 3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3082
| DNA transposon, TIR, Mariner |
DTT_Athos_M801L24-1 |
85 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP226
| DNA transposon, TIR, Mariner |
DTT_Athos_X65606-1 |
85 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP233
| DNA transposon, TIR, Mariner |
DTT_Eos_AF326781-1 |
354 |
Stowaway MITE, complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2260
| DNA transposon, TIR, Mariner |
DTT_Eos_EF067844-1 |
326 |
Stowaway MITE, truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP1612
| DNA transposon, TIR, Mariner |
DTT_Fortuna_109N23-1 |
306 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP236
| DNA transposon, TIR, Mariner |
DTT_Fortuna_AF326781-1 |
316 |
Stowaway MITE, complete element, (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1246
| DNA transposon, TIR, Mariner |
DTT_Fortuna_AF326781-2 |
343 |
Stowaway MITE, truncated |
Triticum monococcum |
Thomas Wicker |
| TREP2015
| DNA transposon, TIR, Mariner |
DTT_Fortuna_AY853252-1 |
358 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3450
| DNA transposon, TIR, Mariner |
DTT_Fortuna_consensus-1 |
353 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2276
| DNA transposon, TIR, Mariner |
DTT_Hades_103H9-1 |
60 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP1600
| DNA transposon, TIR, Mariner |
DTT_Hades_109N23-1 |
46 |
Stowaway MITE, fragment |
Triticum monococcum |
|
| TREP3083
| DNA transposon, TIR, Mariner |
DTT_Hades_10k23-1 |
97 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2277
| DNA transposon, TIR, Mariner |
DTT_Hades_210J24-1 |
60 |
Stowaway MITE, complete element |
Triticum urartu |
Eduard Akhunov |
| TREP1805
| DNA transposon, TIR, Mariner |
DTT_Hades_294D11-1 |
131 |
Stowaway MITE, complete element (2bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3084
| DNA transposon, TIR, Mariner |
DTT_Hades_42j2-1 |
97 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3085
| DNA transposon, TIR, Mariner |
DTT_Hades_42j2-4 |
97 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2211
| DNA transposon, TIR, Mariner |
DTT_Hades_464G14-1 |
96 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2278
| DNA transposon, TIR, Mariner |
DTT_Hades_509D2-1 |
96 |
Stowaway MITE |
Hordeum vulgare |
Thomas Wicker |
| TREP2279
| DNA transposon, TIR, Mariner |
DTT_Hades_509D2-2 |
97 |
Stowaway MITE |
Hordeum vulgare |
Thomas Wicker |
| TREP2281
| DNA transposon, TIR, Mariner |
DTT_Hades_643D12-1 |
60 |
Stowaway MITE, complete element |
Triticum durum |
Eduard Akhunov |
| TREP219
| DNA transposon, TIR, Mariner |
DTT_Hades_AF380335-1 |
104 |
Stowaway MITE, complete element (2 bp TSD) |
Oryza sativa |
Thomas Wicker |
| TREP739
| DNA transposon, TIR, Mariner |
DTT_Hades_AF427791-1 |
108 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP981
| DNA transposon, TIR, Mariner |
DTT_Hades_AJ436472-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP982
| DNA transposon, TIR, Mariner |
DTT_Hades_AJ463484-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP983
| DNA transposon, TIR, Mariner |
DTT_Hades_AJ466738-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP984
| DNA transposon, TIR, Mariner |
DTT_Hades_AJ466739-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP985
| DNA transposon, TIR, Mariner |
DTT_Hades_AL501742-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP986
| DNA transposon, TIR, Mariner |
DTT_Hades_AL504417-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP987
| DNA transposon, TIR, Mariner |
DTT_Hades_AV834351-1 |
96 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP988
| DNA transposon, TIR, Mariner |
DTT_Hades_AV835808-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP989
| DNA transposon, TIR, Mariner |
DTT_Hades_AV923231-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP990
| DNA transposon, TIR, Mariner |
DTT_Hades_AV936362-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP991
| DNA transposon, TIR, Mariner |
DTT_Hades_AV936369-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP992
| DNA transposon, TIR, Mariner |
DTT_Hades_AV945427-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1657
| DNA transposon, TIR, Mariner |
DTT_Hades_AY643842-1 |
98 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1656
| DNA transposon, TIR, Mariner |
DTT_Hades_AY643844-1 |
88 |
Stowaway MITE, fragment |
Hordeum vulgare |
Katherine Caldwell |
| TREP1525
| DNA transposon, TIR, Mariner |
DTT_Hades_AY661558-1 |
86 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2078
| DNA transposon, TIR, Mariner |
DTT_Hades_AY853252-1 |
97 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP993
| DNA transposon, TIR, Mariner |
DTT_Hades_BE400114-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP994
| DNA transposon, TIR, Mariner |
DTT_Hades_BE413737-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP995
| DNA transposon, TIR, Mariner |
DTT_Hades_BE420105-1 |
55 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP996
| DNA transposon, TIR, Mariner |
DTT_Hades_BE420821-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP997
| DNA transposon, TIR, Mariner |
DTT_Hades_BE426994-1 |
96 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP998
| DNA transposon, TIR, Mariner |
DTT_Hades_BE498099-1 |
64 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP999
| DNA transposon, TIR, Mariner |
DTT_Hades_BE517395-1 |
61 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1000
| DNA transposon, TIR, Mariner |
DTT_Hades_BE704509-1 |
97 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP1001
| DNA transposon, TIR, Mariner |
DTT_Hades_BE704981-1 |
51 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP1002
| DNA transposon, TIR, Mariner |
DTT_Hades_BF293216-1 |
86 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1003
| DNA transposon, TIR, Mariner |
DTT_Hades_BF588685-1 |
62 |
Stowaway MITE, complete element |
Homo sapiens |
Thomas Wicker |
| TREP1004
| DNA transposon, TIR, Mariner |
DTT_Hades_BF628687-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1005
| DNA transposon, TIR, Mariner |
DTT_Hades_BG905880-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1006
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ207484-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1007
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ214760-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1008
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ218090-1 |
96 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1009
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ227450-1 |
100 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1010
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ237878-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1011
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ252131-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1012
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ252139-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1013
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ253353-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1014
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ268521-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1015
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ268537-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1016
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ274279-1 |
96 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1017
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ275101-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1018
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ276947-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1019
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ311919-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1020
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ466980-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1021
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ473839-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1022
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ474469-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1023
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ475231-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1024
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ482465-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1025
| DNA transposon, TIR, Mariner |
DTT_Hades_BJ484507-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1026
| DNA transposon, TIR, Mariner |
DTT_Hades_BM138552-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1027
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ159435-1 |
64 |
Stowaway MITE, complete element |
Aegilops speltoides |
Thomas Wicker |
| TREP1028
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ160399-1 |
108 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP1029
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ161682-1 |
96 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1030
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ162173-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1031
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ169086-1 |
86 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1032
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ169378-1 |
64 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1033
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ172311-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1034
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ236621-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1035
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ243447-1 |
86 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1036
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ244892-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1037
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ471723-1 |
97 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1038
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ579106-1 |
98 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1039
| DNA transposon, TIR, Mariner |
DTT_Hades_BQ606417-1 |
97 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3528
| DNA transposon, TIR, Mariner |
DTT_Hades_consensus-1 |
96 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3086
| DNA transposon, TIR, Mariner |
DTT_Hades_M801L24-2 |
97 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP215
| DNA transposon, TIR, Mariner |
DTT_Hercules_AC079936-1 |
239 |
Stowaway MITE, complete element |
Oryza sativa |
Thomas Wicker |
| TREP2285
| DNA transposon, TIR, Mariner |
DTT_Icarus_103H9-1 |
74 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP1613
| DNA transposon, TIR, Mariner |
DTT_Icarus_109N23-1 |
107 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP3087
| DNA transposon, TIR, Mariner |
DTT_Icarus_10k23-1 |
74 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1807
| DNA transposon, TIR, Mariner |
DTT_Icarus_294D11-1 |
111 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1808
| DNA transposon, TIR, Mariner |
DTT_Icarus_294D11-2 |
60 |
Stowaway MITE, 3'fragment |
Triticum durum |
Thomas Wicker |
| TREP1809
| DNA transposon, TIR, Mariner |
DTT_Icarus_294D11-3 |
121 |
Stowaway MITE, fragment |
Triticum durum |
Thomas Wicker |
| TREP1810
| DNA transposon, TIR, Mariner |
DTT_Icarus_294D11-4 |
105 |
Stowaway MITE, fragment |
Triticum durum |
Thomas Wicker |
| TREP3088
| DNA transposon, TIR, Mariner |
DTT_Icarus_42j2-10 |
107 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3089
| DNA transposon, TIR, Mariner |
DTT_Icarus_42j2-4 |
127 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3090
| DNA transposon, TIR, Mariner |
DTT_Icarus_42j2-6 |
117 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3091
| DNA transposon, TIR, Mariner |
DTT_Icarus_42j2-9 |
125 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2280
| DNA transposon, TIR, Mariner |
DTT_Icarus_509D2-3 |
116 |
Stowaway MITE |
Hordeum vulgare |
Thomas Wicker |
| TREP1040
| DNA transposon, TIR, Mariner |
DTT_Icarus_AV836460-1 |
117 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1041
| DNA transposon, TIR, Mariner |
DTT_Icarus_AV912559-1 |
117 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1042
| DNA transposon, TIR, Mariner |
DTT_Icarus_AV928891-1 |
116 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1043
| DNA transposon, TIR, Mariner |
DTT_Icarus_AW448234-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP830
| DNA transposon, TIR, Mariner |
DTT_Icarus_AY146587-1 |
103 |
Stowaway MITE, complete element, (2 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1653
| DNA transposon, TIR, Mariner |
DTT_Icarus_AY643842-1 |
116 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP2033
| DNA transposon, TIR, Mariner |
DTT_Icarus_AY853252-3 |
119 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1044
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE404582-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1045
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE420571-1 |
121 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1046
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE443135-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1047
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE492871-1 |
107 |
Stowaway MITE, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP1048
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE500794-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1049
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE517025-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1050
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE517313-1 |
118 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1051
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE585804-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1052
| DNA transposon, TIR, Mariner |
DTT_Icarus_BE591362-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1053
| DNA transposon, TIR, Mariner |
DTT_Icarus_BF292836-1 |
116 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1054
| DNA transposon, TIR, Mariner |
DTT_Icarus_BG607724-1 |
107 |
Stowaway MITE, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP1055
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ207478-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1056
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ211257-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1057
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ214754-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1058
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ216112-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1059
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ220018-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1060
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ222250-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1061
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ227211-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1062
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ228006-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1063
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ233311-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1064
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ233353-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1065
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ238962-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1066
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ239005-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1067
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ241132-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1068
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ249702-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1069
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ249763-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1070
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ257156-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1071
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ257171-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1072
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ262731-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1073
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ262747-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1074
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ263892-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1075
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ270068-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1076
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ270289-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1077
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ272697-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1078
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ274200-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1079
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ276129-1 |
127 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1080
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ282470-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1081
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ285855-1 |
118 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1082
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ294298-1 |
106 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1083
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ306535-1 |
116 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1084
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ311342-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1085
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ311657-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1086
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ312506-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1087
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ313173-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1088
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ318201-1 |
108 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1089
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ318914-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1090
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ321432-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1091
| DNA transposon, TIR, Mariner |
DTT_Icarus_BJ478065-1 |
117 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1092
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ159495-1 |
117 |
Stowaway MITE, complete element |
Aegilops speltoides |
Thomas Wicker |
| TREP1093
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ160561-1 |
127 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP1094
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ160724-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1095
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ166298-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1096
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ166320-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1097
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ166812-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1098
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ168741-1 |
117 |
Stowaway MITE, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP1099
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ171320-1 |
109 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1100
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ237274-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1101
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ281137-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1102
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ281801-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1103
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ281969-1 |
108 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1104
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ465197-1 |
116 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1105
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ605897-1 |
117 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1106
| DNA transposon, TIR, Mariner |
DTT_Icarus_BQ619821-1 |
107 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3092
| DNA transposon, TIR, Mariner |
DTT_Icarus_consensus-1 |
112 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3093
| DNA transposon, TIR, Mariner |
DTT_Icarus_M801L24-1 |
116 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3094
| DNA transposon, TIR, Mariner |
DTT_Icarus_M801L24-3 |
116 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP225
| DNA transposon, TIR, Mariner |
DTT_Icarus_X54517-1 |
78 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP2290
| DNA transposon, TIR, Mariner |
DTT_Jason_103H9-1 |
260 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP2291
| DNA transposon, TIR, Mariner |
DTT_Jason_210J24-1 |
253 |
Stowaway MITE, truncated |
Triticum urartu |
Eduard Akhunov |
| TREP2292
| DNA transposon, TIR, Mariner |
DTT_Jason_643D12-1 |
259 |
Stowaway MITE, truncated |
Triticum durum |
Eduard Akhunov |
| TREP242
| DNA transposon, TIR, Mariner |
DTT_Jason_AF325196-1 |
222 |
Stowaway MITE, degenerated |
Triticum aestivum |
Thomas Wicker |
| TREP3095
| DNA transposon, TIR, Mariner |
DTT_Marius_10k23-1 |
695 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3513
| DNA transposon, TIR, Mariner |
DTT_Mercia_DQ885768-1 |
4823 |
complete
element, putative Stowaway Mother element |
Triticeae |
David Laurie |
| TREP3514
| DNA transposon, TIR, Mariner |
DTT_Minimus_DQ885757-1 |
55 |
complete element |
Triticeae |
David Laurie |
| TREP2319
| DNA transposon, TIR, Mariner |
DTT_Oleus_210J24-1 |
84 |
Stowaway MITE, complete element |
Triticum urartu |
Eduard Akhunov |
| TREP2320
| DNA transposon, TIR, Mariner |
DTT_Oleus_643D12-1 |
84 |
Stowaway MITE, complete element |
Triticum durum |
Eduard Akhunov |
| TREP1202
| DNA transposon, TIR, Mariner |
DTT_Oleus_AF490467-1 |
151 |
Stowaway MITE, complete element |
Hordeum vulgare |
|
| TREP1200
| DNA transposon, TIR, Mariner |
DTT_Oleus_AF490468-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
David Laurie |
| TREP1201
| DNA transposon, TIR, Mariner |
DTT_Oleus_AF490468-2 |
151 |
Stowaway MITE, complete element |
Hordeum vulgare |
David Laurie |
| TREP1107
| DNA transposon, TIR, Mariner |
DTT_Oleus_AJ466154-1 |
154 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1108
| DNA transposon, TIR, Mariner |
DTT_Oleus_AV832991-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1109
| DNA transposon, TIR, Mariner |
DTT_Oleus_AV833224-1 |
153 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2090
| DNA transposon, TIR, Mariner |
DTT_Oleus_AY853252-5 |
148 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1110
| DNA transposon, TIR, Mariner |
DTT_Oleus_BE437667-1 |
158 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1111
| DNA transposon, TIR, Mariner |
DTT_Oleus_BF265949-1 |
151 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1112
| DNA transposon, TIR, Mariner |
DTT_Oleus_BG369376-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1113
| DNA transposon, TIR, Mariner |
DTT_Oleus_BJ474521-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1114
| DNA transposon, TIR, Mariner |
DTT_Oleus_BJ475416-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1115
| DNA transposon, TIR, Mariner |
DTT_Oleus_BJ479328-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1116
| DNA transposon, TIR, Mariner |
DTT_Oleus_BJ479505-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1117
| DNA transposon, TIR, Mariner |
DTT_Oleus_BM368339-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1118
| DNA transposon, TIR, Mariner |
DTT_Oleus_BM816011-1 |
154 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1119
| DNA transposon, TIR, Mariner |
DTT_Oleus_BM816043-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1120
| DNA transposon, TIR, Mariner |
DTT_Oleus_BQ468447-1 |
150 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1121
| DNA transposon, TIR, Mariner |
DTT_Oleus_BQ472582-1 |
142 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3451
| DNA transposon, TIR, Mariner |
DTT_Oleus_consensus-1 |
150 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2091
| DNA transposon, TIR, Mariner |
DTT_Orion_AY853252-2 |
269 |
Stowaway MITE, degenerated |
Hordeum vulgare |
Marion Roeder |
| TREP2322
| DNA transposon, TIR, Mariner |
DTT_Pan_210J24-1 |
127 |
Stowaway MITE, complete element |
Triticum urartu |
Eduard Akhunov |
| TREP3096
| DNA transposon, TIR, Mariner |
DTT_Pan_42j2-5 |
127 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3097
| DNA transposon, TIR, Mariner |
DTT_Pan_42j2-6 |
127 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2323
| DNA transposon, TIR, Mariner |
DTT_Pan_643D12-1 |
127 |
Stowaway MITE, complete element |
Triticum durum |
Eduard Akhunov |
| TREP216
| DNA transposon, TIR, Mariner |
DTT_Pan_AF277239-1 |
127 |
Stowaway MITE, complete element (2 bp TSD) |
Heteranthelium piliferum |
Thomas Wicker |
| TREP737
| DNA transposon, TIR, Mariner |
DTT_Pan_AF427791-1 |
128 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP738
| DNA transposon, TIR, Mariner |
DTT_Pan_AF427791-2 |
128 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2026
| DNA transposon, TIR, Mariner |
DTT_Pan_AY853252-2 |
127 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2027
| DNA transposon, TIR, Mariner |
DTT_Pan_AY853252-3 |
127 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3098
| DNA transposon, TIR, Mariner |
DTT_Pan_consensus-1 |
127 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3099
| DNA transposon, TIR, Mariner |
DTT_Pan_M801L24-1 |
128 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2036
| DNA transposon, TIR, Mariner |
DTT_Phoebus_AY853252-1 |
319 |
Stowaway MITE, complete element? |
Hordeum vulgare |
Marion Roeder |
| TREP1659
| DNA transposon, TIR, Mariner |
DTT_Pluto_AY643844-1 |
276 |
Stowaway MITE, complete element |
Hordeum vulgare |
Katherine Caldwell |
| TREP2035
| DNA transposon, TIR, Mariner |
DTT_Pluto_AY853252-1 |
278 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2214
| DNA transposon, TIR, Mariner |
DTT_Polyphemus_464G14-1 |
239 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2215
| DNA transposon, TIR, Mariner |
DTT_Polyphemus_464G14-2 |
239 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2216
| DNA transposon, TIR, Mariner |
DTT_Polyphemus_464G14-3 |
241 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP3452
| DNA transposon, TIR, Mariner |
DTT_Polyphemus_consensus-1 |
241 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2037
| DNA transposon, TIR, Mariner |
DTT_Skiron_AY853252-1 |
93 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1548
| DNA transposon, TIR, Mariner |
DTT_Stolos_AY661558-1 |
259 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1549
| DNA transposon, TIR, Mariner |
DTT_Stolos_AY661558-2 |
259 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2034
| DNA transposon, TIR, Mariner |
DTT_Stolos_AY853252-1 |
261 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3453
| DNA transposon, TIR, Mariner |
DTT_Stolos_consensus-1 |
259 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3100
| DNA transposon, TIR, Mariner |
DTT_Tantalos_42j2-1 |
257 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3101
| DNA transposon, TIR, Mariner |
DTT_Thalos_103H9-1 |
165 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP1821
| DNA transposon, TIR, Mariner |
DTT_Thalos_294D11-1 |
122 |
Stowaway MITE, truncated |
Triticum durum |
Thomas Wicker |
| TREP3102
| DNA transposon, TIR, Mariner |
DTT_Thalos_42j2-14 |
162 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3103
| DNA transposon, TIR, Mariner |
DTT_Thalos_42j2-4 |
161 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3104
| DNA transposon, TIR, Mariner |
DTT_Thalos_42j2-9 |
165 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2352
| DNA transposon, TIR, Mariner |
DTT_Thalos_509D2-1 |
163 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2353
| DNA transposon, TIR, Mariner |
DTT_Thalos_509D2-2 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2354
| DNA transposon, TIR, Mariner |
DTT_Thalos_509D2-3 |
156 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3105
| DNA transposon, TIR, Mariner |
DTT_Thalos_59e04-1 |
171 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3106
| DNA transposon, TIR, Mariner |
DTT_Thalos_59e04-2 |
165 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP218
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF338431-1 |
157 |
Stowaway MITE, complete element |
Aegilops tauschii |
Thomas Wicker |
| TREP741
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF427791-1 |
162 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP742
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF427791-2 |
163 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP743
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF427791-3 |
156 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP744
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF427791-4 |
164 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP745
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF427791-5 |
180 |
Stowaway MITE, complete element, (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP30
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF459639-1 |
164 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP31
| DNA transposon, TIR, Mariner |
DTT_Thalos_AF459639-2 |
163 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP1122
| DNA transposon, TIR, Mariner |
DTT_Thalos_AJ435122-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1123
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV833789-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1124
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV923145-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1125
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV923742-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1126
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV926000-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1127
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV932548-1 |
160 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1128
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV934649-1 |
159 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP950
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV935497-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP951
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV935504-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP952
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV935714-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP953
| DNA transposon, TIR, Mariner |
DTT_Thalos_AV935753-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP813
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY146588-1 |
163 |
Stowaway MITE, complete element, (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP814
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY146588-1 |
163 |
Stowaway MITE, complete element, (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1655
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY643842-1 |
166 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1658
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY643844-1 |
161 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1557
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY661558-1 |
156 |
Stowaway MITE, fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1558
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY661558-2 |
164 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1559
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY661558-3 |
163 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1560
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY661558-4 |
140 |
Stowaway MITE, 5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2042
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-1 |
165 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2095
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-11 |
164 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2096
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-12 |
114 |
Stowaway MITE, 5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2097
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-13 |
153 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2043
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-2 |
164 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2044
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-3 |
164 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2045
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-4 |
162 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2099
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-5 |
169 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2100
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-6 |
165 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2101
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-7 |
165 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2103
| DNA transposon, TIR, Mariner |
DTT_Thalos_AY853252-9 |
167 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1129
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE195396-1 |
165 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1130
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE213598-1 |
166 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP954
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE398379-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP955
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE405570-1 |
114 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1131
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE423851-1 |
176 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1132
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE427929-1 |
164 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP956
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE443858-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP957
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE444567-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP958
| DNA transposon, TIR, Mariner |
DTT_Thalos_BE446334-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1133
| DNA transposon, TIR, Mariner |
DTT_Thalos_BF260264-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP959
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG904280-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP960
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG904281-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1134
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG904521-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1135
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG904984-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1136
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG908954-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1137
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG908955-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP961
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG909125-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1138
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG909307-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1139
| DNA transposon, TIR, Mariner |
DTT_Thalos_BG909701-1 |
162 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP962
| DNA transposon, TIR, Mariner |
DTT_Thalos_BI950824-1 |
163 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1140
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ209575-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1141
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ213327-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP963
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ215241-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP964
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ257448-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP965
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ263027-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1142
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ268330-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1143
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ269038-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1144
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ269981-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP966
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ271717-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1145
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ272612-1 |
160 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP967
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ273584-1 |
161 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP968
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ273964-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1146
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ274652-1 |
166 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1147
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ274964-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1148
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ276470-1 |
164 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP969
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ276941-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP970
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ287935-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP971
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ294258-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1149
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ304139-1 |
161 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1150
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ319284-1 |
164 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1151
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ469059-1 |
160 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1152
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ473498-1 |
159 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP972
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ480160-1 |
162 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP973
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ485769-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP974
| DNA transposon, TIR, Mariner |
DTT_Thalos_BJ486760-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP975
| DNA transposon, TIR, Mariner |
DTT_Thalos_BM100982-1 |
163 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1153
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ159471-1 |
165 |
Stowaway MITE, complete element |
Aegilops speltoides |
Thomas Wicker |
| TREP1154
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ160341-1 |
162 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP1155
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ170948-1 |
157 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP976
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ237328-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP977
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ239676-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP978
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ246402-1 |
163 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1156
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ247152-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1157
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ458377-1 |
166 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP979
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ461237-1 |
163 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP980
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ463852-1 |
163 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1158
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ472049-1 |
164 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1159
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ484001-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1160
| DNA transposon, TIR, Mariner |
DTT_Thalos_BQ620108-1 |
165 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3107
| DNA transposon, TIR, Mariner |
DTT_Thalos_consensus-1 |
162 |
Stowaway MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2255
| DNA transposon, TIR, Mariner |
DTT_Thalos_EF067844-1 |
162 |
Stowaway MITE, complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3108
| DNA transposon, TIR, Mariner |
DTT_Thalos_M801L24-2 |
164 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3109
| DNA transposon, TIR, Mariner |
DTT_Thalos_M801L24-3 |
163 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3110
| DNA transposon, TIR, Mariner |
DTT_Thalos_M801L24-4 |
164 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3111
| DNA transposon, TIR, Mariner |
DTT_Thalos_M801L24-5 |
163 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1580
| DNA transposon, TIR, Mariner |
DTT_Xados_AF521177-1 |
116 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1570
| DNA transposon, TIR, Mariner |
DTT_Xados_AY661558-1 |
213 |
Stowaway MITE, tandem-element |
Hordeum vulgare |
Thomas Wicker |
| TREP229
| DNA transposon, TIR, unknown |
DTX_Belus_AF326781-1 |
177 |
putative, complete element, (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP732
| DNA transposon, TIR, unknown |
DTX_Erato_AF427791-1 |
187 |
putative, putative |
Hordeum vulgare |
Thomas Wicker |
| TREP734
| DNA transposon, TIR, unknown |
DTX_Erato_AF427791-3 |
187 |
putative, putative |
Hordeum vulgare |
Thomas Wicker |
| TREP237
| DNA transposon, TIR, unknown |
DTX_Gorgon_AF326781-1 |
66 |
putative, complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP244
| DNA transposon, TIR, unknown |
DTX_Keres_AF325198-1 |
75 |
putative |
Triticum aestivum |
Thomas Wicker |
| TREP1651
| DNA transposon, TIR, unknown |
DTX_Nisos_AY643844-1 |
57 |
putative |
Hordeum vulgare |
Katherine Caldwell |
| TREP3112
| DNA transposon, TIR, unknown |
DTX_Pegasus_AY013246-1 |
1167 |
complete element |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP3314
| DNA transposon, TIR, unknown |
DTX_unnamed_42j2-1 |
343 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1169
| DNA transposon, TIR, HAT |
DXX_George_AF521177-1 |
7835 |
putative, fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP733
| DNA transposon, unknown, unknown |
DXX_Hylas_AF427791-2 |
528 |
putative, putative |
Hordeum vulgare |
Thomas Wicker |
| TREP1718
| DNA transposon, unknown, unknown |
DXX_Misenos_1020F19-1 |
193 |
putative, putative |
Triticum aestivum |
Thomas Wicker |
| TREP1817
| DNA transposon, unknown, unknown |
DXX_Mordred_294D11-1 |
203 |
putative, complete element (2 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1719
| DNA transposon, unknown, unknown |
DXX_Nisos_1020F19-1 |
265 |
putative, putative |
Triticum aestivum |
Thomas Wicker |
| TREP3315
| DNA transposon, unknown, unknown |
DXX_unnamed_59e04-1 |
731 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP48
| DNA transposon, unknown, unknown |
DXX_unnamed_993T3-1 |
616 |
putative, fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP32
| DNA transposon, unknown, unknown |
DXX_unnamed_AY013246-1 |
1869 |
putative, putative |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP43
| DNA transposon, unknown, unknown |
DXX_unnamed_M38471-1 |
296 |
putative, fragment of CDS |
Hordeum vulgare |
GenBank |
| TREP1725
| DNA transposon, unknown, unknown |
DXX_Xitos_1020F19-1 |
3865 |
putative, fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3316
| DNA transposon, unknown, unknown |
DXX_Xitos_42j2-1 |
3812 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1726
| DNA transposon, unknown, unknown |
DXX_Xitos_AH013688-1 |
4031 |
putative, fragment |
Aegilops tauschii |
Thomas Wicker |
|
| Retrotransposons |
|
| Accession |
Classification |
Family name |
Size |
Comment |
Organism |
Submitted by |
| TREP719
| Retrotransposon, LINE, unknown |
RIX_Alexandra_AF427791-1 |
3405 |
complete element, (7 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP212
| Retrotransposon, LINE, unknown |
RIX_BALN2_AB016120-1 |
414 |
fragment of endonuclease |
Hordeum vulgare |
Thomas Wicker |
| TREP238
| Retrotransposon, LINE, unknown |
RIX_Isabelle_AF326781-1 |
8408 |
complete element, (6 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1712
| Retrotransposon, LINE, unknown |
RIX_Karin_1020F19-1 |
2308 |
3' end |
Triticum aestivum |
Thomas Wicker |
| TREP1713
| Retrotransposon, LINE, unknown |
RIX_Karin_1020F19-2 |
1799 |
3'end |
Triticum aestivum |
Thomas Wicker |
| TREP1815
| Retrotransposon, LINE, unknown |
RIX_Karin_294D11-2 |
6249 |
complete element ( bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP2212
| Retrotransposon, LINE, unknown |
RIX_Karin_464G14-1 |
7223 |
complete element? |
Triticum aestivum |
Silvie Cloutier |
| TREP2296
| Retrotransposon, LINE, unknown |
RIX_Karin_604D5-1 |
3660 |
5' truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP243
| Retrotransposon, LINE, unknown |
RIX_Karin_AF325197-1 |
3105 |
fragment of 3' region |
Triticum aestivum |
Thomas Wicker |
| TREP1310
| Retrotransposon, LINE, unknown |
RIX_Karin_AF459088-1 |
6413 |
putative complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP832
| Retrotransposon, LINE, unknown |
RIX_Karin_AY146587-1 |
7853 |
complete element, (6 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP800
| Retrotransposon, LINE, unknown |
RIX_Karin_AY146588-1 |
1573 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP801
| Retrotransposon, LINE, unknown |
RIX_Karin_AY146588-2 |
536 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP802
| Retrotransposon, LINE, unknown |
RIX_Karin_AY146588-3 |
1040 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP2084
| Retrotransposon, LINE, unknown |
RIX_Karin_AY853252-1 |
3398 |
partial CDS |
Hordeum vulgare |
Marion Roeder |
| TREP3454
| Retrotransposon, LINE, unknown |
RIX_Karin_consensus-1 |
7904 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP214
| Retrotransposon, LINE, unknown |
RIX_Mara_AB012296-1 |
2016 |
fragment of CDS |
Triticum aestivum |
Thomas Wicker |
| TREP256
| Retrotransposon, LINE, unknown |
RIX_Miuse_115G1-1 |
7025 |
complete element |
Triticum monococcum |
|
| TREP1818
| Retrotransposon, LINE, unknown |
RIX_Morpheus_294D11-2 |
230 |
3'end |
Triticum durum |
Thomas Wicker |
| TREP1643
| Retrotransposon, LINE, unknown |
RIX_Morpheus_AY643843-1 |
7978 |
complete element (6 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP53
| Retrotransposon, LINE, unknown |
RIX_Nadine_AJ270054-1 |
594 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP52
| Retrotransposon, LINE, unknown |
RIX_Nadine_AJ270056-1 |
6320 |
complete element (9 bp TSD) |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP2314
| Retrotransposon, LINE, unknown |
RIX_Nala_210J24-1 |
5553 |
5' truncated |
Triticum urartu |
Eduard Akhunov |
| TREP2315
| Retrotransposon, LINE, unknown |
RIX_Nala_643D12-1 |
5563 |
5' truncated |
Triticum durum |
Eduard Akhunov |
| TREP3120
| Retrotransposon, LINE, unknown |
RIX_Nicole_42j2-10 |
615 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3121
| Retrotransposon, LINE, unknown |
RIX_Nicole_42j2-11 |
2310 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3122
| Retrotransposon, LINE, unknown |
RIX_Nicole_42j2-12 |
320 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3123
| Retrotransposon, LINE, unknown |
RIX_Nicole_42j2-13 |
2608 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3124
| Retrotransposon, LINE, unknown |
RIX_Nicole_42j2-4 |
510 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2321
| Retrotransposon, LINE, unknown |
RIX_Ophelia_EF067844-1 |
5315 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP804
| Retrotransposon, LINE, unknown |
RIX_Paula_AY146588-1 |
8163 |
complete element, (6 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1634
| Retrotransposon, LINE, unknown |
RIX_Persephone_AY643843-1 |
7919 |
|
Hordeum vulgare |
Katherine Caldwell |
| TREP1608
| Retrotransposon, LINE, unknown |
RIX_Ramona_109N23-1 |
3705 |
fragment |
Triticum monococcum |
|
| TREP24
| Retrotransposon, LINE, unknown |
RIX_Ramona_464G14-1 |
2934 |
complete element? |
Triticum aestivum |
Silvie Cloutier |
| TREP3322
| Retrotransposon, LINE, unknown |
RIX_Reina_EF540321-1 |
3380 |
fragment |
Triticum turgidum |
Jorge Dubcovsky |
| TREP2032
| Retrotransposon, LINE, unknown |
RIX_Sara_AY853252-1 |
1205 |
3' fragment of CDS |
Hordeum vulgare |
Marion Roeder |
| TREP1820
| Retrotransposon, LINE, unknown |
RIX_Stasy_294D11-1 |
3306 |
complete element (15 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3323
| Retrotransposon, LINE, unknown |
RIX_Stasy_EF540321-1 |
2915 |
fragment |
Triticum turgidum |
Jorge Dubcovsky |
| TREP3113
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-1 |
2975 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3317
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-1 |
246 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3114
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-10 |
222 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3318
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-2 |
563 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3319
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-3 |
1519 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3320
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-4 |
1133 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3321
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-5 |
2817 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3115
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-6 |
3077 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3116
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-7 |
393 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3117
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-8 |
2269 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3118
| Retrotransposon, LINE, unknown |
RIX_unnamed_42j2-9 |
855 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2304
| Retrotransposon, LINE, unknown |
RIX_unnamed_509D2-1 |
1201 |
truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP3119
| Retrotransposon, LINE, unknown |
RIX_unnamed_59e04-1 |
2964 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP51
| Retrotransposon, LINE, unknown |
RIX_unnamed_AJ270053-1 |
585 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP58
| Retrotransposon, LINE, unknown |
RIX_unnamed_AJ270055-1 |
602 |
fragment of reverse transcriptase |
Hordeum marinum |
Heslop-Harrison J.S. |
| TREP20
| Retrotransposon, LINE, unknown |
RIX_unnamed_AY013246-1 |
4940 |
3' truncated |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP803
| Retrotransposon, LINE, unknown |
RIX_unnamed_AY146588-1 |
179 |
fragment of reverse transcriptase |
Triticum monococcum |
Thomas Wicker |
| TREP3515
| Retrotransposon, LINE, unknown |
RIX_unnamed_DQ885757-1 |
3444 |
3'fragment |
Triticeae |
David Laurie |
| TREP2303
| Retrotransposon, LINE, unknown |
RIX_unnamed_EF067844-1 |
277 |
degenrated CDS |
Hordeum vulgare |
Takao Komatsuda |
| TREP80
| Retrotransposon, LINE, unknown |
RIX_unnamed_Y13390-1 |
787 |
fragment of reverse transcriptase |
Secale cereale |
Heslop-Harrison J.S. |
| TREP3324
| Retrotransposon, LINE, unknown |
RIX_Wendy_42j2-1 |
1437 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2056
| Retrotransposon, LINE, unknown |
RIX_Yolanda_AY853252-1 |
3419 |
degenerated CDS |
Hordeum vulgare |
Marion Roeder |
| TREP824
| Retrotransposon, LINE, unknown |
RIX_Yvonne_AY146588-1 |
4002 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP1610
| Retrotransposon, LTR, Copia |
RLC_Ale_109N23-1 |
5204 |
complete element (5 bp TSD) |
Triticum monococcum |
|
| TREP3125
| Retrotransposon, LTR, Copia |
RLC_Ale_28f8-1 |
5311 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3126
| Retrotransposon, LTR, Copia |
RLC_Ale_42j2-1 |
5310 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3328
| Retrotransposon, LTR, Copia |
RLC_Ale_42j2-4 |
5185 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1307
| Retrotransposon, LTR, Copia |
RLC_Ale_AF459088-1 |
5061 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP2200
| Retrotransposon, LTR, Copia |
RLC_Ale_AY951944-1 |
3582 |
fragmented |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3455
| Retrotransposon, LTR, Copia |
RLC_Ale_consensus-1 |
5028 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP1700
| Retrotransposon, LTR, Copia |
RLC_Angela_1020F19-1 |
1262 |
fragement of LTR |
Triticum aestivum |
Thomas Wicker |
| TREP1701
| Retrotransposon, LTR, Copia |
RLC_Angela_1020F19-2 |
1695 |
solo-LTR (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1702
| Retrotransposon, LTR, Copia |
RLC_Angela_1020F19-3 |
8606 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1703
| Retrotransposon, LTR, Copia |
RLC_Angela_1020F19-4 |
113 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1602
| Retrotransposon, LTR, Copia |
RLC_Angela_109N23-1 |
3415 |
fragment |
Triticum monococcum |
|
| TREP1604
| Retrotransposon, LTR, Copia |
RLC_Angela_109N23-2 |
8726 |
complete element (5 bp TSD) |
Triticum monococcum |
|
| TREP1606
| Retrotransposon, LTR, Copia |
RLC_Angela_109N23-3 |
8391 |
complete element (5 bp TSD) |
Triticum monococcum |
|
| TREP1611
| Retrotransposon, LTR, Copia |
RLC_Angela_109N23-4 |
1745 |
solo-LTR (5 bp TSD) |
Triticum monococcum |
|
| TREP247
| Retrotransposon, LTR, Copia |
RLC_Angela_115G1-1 |
6420 |
fragment of 5' region |
Triticum monococcum |
|
| TREP246
| Retrotransposon, LTR, Copia |
RLC_Angela_116F2-1 |
8534 |
complete element |
Triticum monococcum |
|
| TREP248
| Retrotransposon, LTR, Copia |
RLC_Angela_116F2-2 |
5943 |
fragment of 5' region |
Triticum monococcum |
|
| TREP249
| Retrotransposon, LTR, Copia |
RLC_Angela_116F2-3 |
2844 |
fragment of 3' region |
Triticum monococcum |
|
| TREP26
| Retrotransposon, LTR, Copia |
RLC_Angela_210J24-1 |
7203 |
5' truncated |
Triticum urartu |
Eduard Akhunov |
| TREP27
| Retrotransposon, LTR, Copia |
RLC_Angela_210J24-2 |
1654 |
solo-LTR |
Triticum urartu |
Eduard Akhunov |
| TREP2203
| Retrotransposon, LTR, Copia |
RLC_Angela_210J24-3 |
8569 |
complete element |
Triticum urartu |
Eduard Akhunov |
| TREP1219
| Retrotransposon, LTR, Copia |
RLC_Angela_231A16-1 |
8588 |
complete element |
Triticum monococcum |
|
| TREP1800
| Retrotransposon, LTR, Copia |
RLC_Angela_294D11-2 |
6240 |
5' fragment |
Triticum durum |
Thomas Wicker |
| TREP3127
| Retrotransposon, LTR, Copia |
RLC_Angela_42j2-4 |
8647 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP25
| Retrotransposon, LTR, Copia |
RLC_Angela_464G14-1 |
8625 |
3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2201
| Retrotransposon, LTR, Copia |
RLC_Angela_464G14-2 |
5434 |
5'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3128
| Retrotransposon, LTR, Copia |
RLC_Angela_59e04-1 |
8561 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1220
| Retrotransposon, LTR, Copia |
RLC_Angela_609E6-1 |
845 |
5' fragment of LTR |
Triticum monococcum |
|
| TREP1221
| Retrotransposon, LTR, Copia |
RLC_Angela_609E6-2 |
8730 |
complete element |
Triticum monococcum |
|
| TREP1222
| Retrotransposon, LTR, Copia |
RLC_Angela_609E6-3 |
8724 |
complete element |
Triticum monococcum |
|
| TREP29
| Retrotransposon, LTR, Copia |
RLC_Angela_643D12-1 |
4028 |
complete element, internal deletion |
Triticum durum |
Eduard Akhunov |
| TREP34
| Retrotransposon, LTR, Copia |
RLC_Angela_643D12-2 |
1489 |
truncated |
Triticum durum |
Eduard Akhunov |
| TREP35
| Retrotransposon, LTR, Copia |
RLC_Angela_643D12-3 |
8566 |
complete element |
Triticum durum |
Eduard Akhunov |
| TREP36
| Retrotransposon, LTR, Copia |
RLC_Angela_643D12-4 |
850 |
3' truncated |
Triticum durum |
Eduard Akhunov |
| TREP128
| Retrotransposon, LTR, Copia |
RLC_Angela_643D12-5 |
8582 |
complete element |
Triticum durum |
Eduard Akhunov |
| TREP3529
| Retrotransposon, LTR, Copia |
RLC_Angela_A_consensus-1 |
8724 |
consensus sequence, subfamily A |
Triticeae |
Thomas Wicker |
| TREP614
| Retrotransposon, LTR, Copia |
RLC_Angela_AB077369-1 |
423 |
5' fragment of LTR |
Aegilops speltoides |
Hisashi Tsujimoto |
| TREP618
| Retrotransposon, LTR, Copia |
RLC_Angela_AB077371-1 |
492 |
fragment of LTR |
Leymus racemosus |
Hisashi Tsujimoto |
| TREP227
| Retrotransposon, LTR, Copia |
RLC_Angela_AF326781-6 |
8652 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1401
| Retrotransposon, LTR, Copia |
RLC_Angela_AF497474-1 |
8765 |
complete element |
Aegilops tauschii |
Yong Qiang Gu |
| TREP1402
| Retrotransposon, LTR, Copia |
RLC_Angela_AF497474-3 |
8526 |
complete element |
Aegilops tauschii |
Yong Qiang Gu |
| TREP826
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146587-1 |
8731 |
complete element, (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP789
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-1 |
1743 |
solo-LTR, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP794
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-1 |
5000 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP790
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-2 |
4394 |
fragment of 5' region |
Triticum monococcum |
Thomas Wicker |
| TREP791
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-3 |
4390 |
fragment of 5' region |
Triticum monococcum |
Thomas Wicker |
| TREP792
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-4 |
8721 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP793
| Retrotransposon, LTR, Copia |
RLC_Angela_AY146588-5 |
8599 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3129
| Retrotransposon, LTR, Copia |
RLC_Angela_AY534123-1 |
8553 |
complete element |
Aegilops tauschii |
Thomas Wicker |
| TREP129
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951944-1 |
1808 |
solo-LTR, 400 bp deletion at 1008 |
Triticum monococcum |
Jorge Dubcovsky |
| TREP110
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951944-2 |
277 |
truncated LTR |
Triticum monococcum |
Jorge Dubcovsky |
| TREP111
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951944-3 |
8490 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP112
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951945-1 |
1968 |
5' truncated |
Triticum monococcum |
Jorge Dubcovsky |
| TREP113
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951945-2 |
1741 |
solo-LTR |
Triticum monococcum |
Jorge Dubcovsky |
| TREP114
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951945-3 |
7091 |
5' truncated |
Triticum monococcum |
Jorge Dubcovsky |
| TREP115
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951945-4 |
3348 |
5' truncated |
Triticum monococcum |
Jorge Dubcovsky |
| TREP23
| Retrotransposon, LTR, Copia |
RLC_Angela_AY951945-5 |
10475 |
complete element (recombined) |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3530
| Retrotransposon, LTR, Copia |
RLC_Angela_B_consensus-1 |
8577 |
consensus sequence, subfamily A |
Triticeae |
Thomas Wicker |
| TREP2057
| Retrotransposon, LTR, Copia |
RLC_Anna_AY853252-1 |
7137 |
ends truncated? |
Hordeum vulgare |
Marion Roeder |
| TREP3130
| Retrotransposon, LTR, Copia |
RLC_Barbara_10k23-1 |
9820 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP127
| Retrotransposon, LTR, Copia |
RLC_Barbara_210J24-1 |
8842 |
complete element |
Triticum urartu |
Eduard Akhunov |
| TREP2228
| Retrotransposon, LTR, Copia |
RLC_Barbara_210J24-2 |
1758 |
solo-LTR |
Triticum urartu |
Eduard Akhunov |
| TREP2229
| Retrotransposon, LTR, Copia |
RLC_Barbara_210J24-3 |
9351 |
complete element |
Triticum urartu |
Eduard Akhunov |
| TREP3131
| Retrotransposon, LTR, Copia |
RLC_Barbara_59e04-1 |
9903 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1224
| Retrotransposon, LTR, Copia |
RLC_Barbara_609E6-1 |
8197 |
3' truncated |
Triticum monococcum |
|
| TREP2230
| Retrotransposon, LTR, Copia |
RLC_Barbara_643D12-1 |
1604 |
3' truncated |
Triticum durum |
Eduard Akhunov |
| TREP228
| Retrotransposon, LTR, Copia |
RLC_Barbara_AF326781-1 |
9832 |
5'fragment |
Triticum monococcum |
Thomas Wicker |
| TREP3456
| Retrotransposon, LTR, Copia |
RLC_Barbara_consensus-1 |
9904 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3132
| Retrotransposon, LTR, Copia |
RLC_BARE1_A_consensus-1 |
8627 |
Subfamily A, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP721
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
1836 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP723
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
8612 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP724
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
7673 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP725
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
8586 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP726
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
8595 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP727
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-1 |
8614 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP722
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF427791-2 |
1788 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP705
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474371-1 |
8604 |
complete element |
Hordeum vulgare |
|
| TREP706
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474371-2 |
8842 |
complete element |
Hordeum vulgare |
|
| TREP707
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474371-3 |
8688 |
complete element, degenerated CDS |
Hordeum vulgare |
|
| TREP711
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474372-1 |
8606 |
complete element |
Hordeum vulgare |
|
| TREP712
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474372-2 |
5801 |
5' truncated |
Hordeum vulgare |
|
| TREP700
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474982-1 |
8786 |
complete element |
Hordeum vulgare |
Phillip J. SanMiguel |
| TREP702
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474982-2 |
8629 |
complete element |
Hordeum vulgare |
Phillip J. SanMiguel |
| TREP701
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474982-3 |
2106 |
fragment of 5' region |
Hordeum vulgare |
Phillip J. SanMiguel |
| TREP703
| Retrotransposon, LTR, Copia |
RLC_BARE1_AF474982-4 |
4492 |
fragment of 5' region |
Hordeum vulgare |
Phillip J. SanMiguel |
| TREP103
| Retrotransposon, LTR, Copia |
RLC_BARE1_AJ303051-1 |
268 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP12
| Retrotransposon, LTR, Copia |
RLC_BARE1_AJ303051-2 |
462 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP1403
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY268139-1 |
8618 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1448
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY268139-2 |
1788 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1405
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY268139-4 |
8727 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1450
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY268139-5 |
1736 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1623
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643843-1 |
8926 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1628
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-1 |
9213 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1624
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-2 |
8941 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1629
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-2 |
8629 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1625
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-3 |
8967 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1631
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-3 |
1817 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1627
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-4 |
1828 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1632
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-4 |
1823 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1626
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-5 |
8513 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1630
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY643844-5 |
5021 |
|
Hordeum vulgare |
Katherine Caldwell |
| TREP1500
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-1 |
8954 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1501
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-2 |
8665 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1502
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-3 |
1857 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1503
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-4 |
7281 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1504
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-5 |
2077 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1505
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-6 |
8938 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1506
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-7 |
8812 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1507
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-8 |
8928 |
3' end 2 bp truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP1508
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY661558-9 |
1831 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2059
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY853252-1 |
8865 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2060
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY853252-2 |
1817 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2061
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY853252-3 |
8413 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2062
| Retrotransposon, LTR, Copia |
RLC_BARE1_AY853252-4 |
2116 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3133
| Retrotransposon, LTR, Copia |
RLC_BARE1_B_consensus-1 |
8928 |
Subfamily B, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3134
| Retrotransposon, LTR, Copia |
RLC_BARE1_C_consensus-1 |
8834 |
Subfamily C, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2232
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-1 |
8605 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2231
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-10 |
307 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2233
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-2 |
1827 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP2234
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-3 |
1821 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP2235
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-4 |
8620 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2236
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-5 |
8834 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2237
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-6 |
5933 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2238
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-7 |
1046 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2239
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-8 |
1831 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP2240
| Retrotransposon, LTR, Copia |
RLC_BARE1_EF067844-9 |
1752 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP3135
| Retrotransposon, LTR, Copia |
RLC_BARE1_M191K21-1 |
8372 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3136
| Retrotransposon, LTR, Copia |
RLC_BARE1_M191K21-2 |
8935 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3137
| Retrotransposon, LTR, Copia |
RLC_BARE1_M191K21-3 |
8598 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3138
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-10 |
2702 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP3139
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-12 |
8388 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3140
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-2 |
8622 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3141
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-3 |
8767 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3142
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-5 |
1809 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP3143
| Retrotransposon, LTR, Copia |
RLC_BARE1_M801L24-8 |
8788 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP18
| Retrotransposon, LTR, Copia |
RLC_BARE1_P2A-1 |
8587 |
complete element |
Hordeum vulgare |
|
| TREP19
| Retrotransposon, LTR, Copia |
RLC_BARE1_P2B-1 |
8927 |
complete element |
Hordeum vulgare |
|
| TREP100
| Retrotransposon, LTR, Copia |
RLC_BARE1_Z17327-1 |
8969 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2376
| Retrotransposon, LTR, Copia |
RLC_Bianca_509D2-1 |
7185 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1161
| Retrotransposon, LTR, Copia |
RLC_Bianca_AF521177-1 |
7693 |
complete element, (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2241
| Retrotransposon, LTR, Copia |
RLC_Bianca_EF067844-1 |
2176 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP1407
| Retrotransposon, LTR, Copia |
RLC_Boba_AY494981-1 |
5408 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP250
| Retrotransposon, LTR, Copia |
RLC_Claudia_116F2-1 |
7656 |
3' truncated |
Triticum monococcum |
|
| TREP1520
| Retrotransposon, LTR, Copia |
RLC_Danica_AY661558-1 |
1507 |
fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP3329
| Retrotransposon, LTR, Copia |
RLC_Daniela_10k23-1 |
11343 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP78
| Retrotransposon, LTR, Copia |
RLC_Elena_AJ240111-1 |
250 |
fragment of reverse transcriptase |
Secale cereale |
Heslop-Harrison J.S. |
| TREP1521
| Retrotransposon, LTR, Copia |
RLC_Elena_AY661558-1 |
1334 |
fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP1522
| Retrotransposon, LTR, Copia |
RLC_Elena_AY661558-2 |
1230 |
fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP2070
| Retrotransposon, LTR, Copia |
RLC_Elena_AY853252-1 |
500 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2071
| Retrotransposon, LTR, Copia |
RLC_Elena_AY853252-2 |
4046 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2263
| Retrotransposon, LTR, Copia |
RLC_Eugene_103H9-1 |
969 |
fragment |
Triticum durum |
Thomas Wicker |
| TREP3144
| Retrotransposon, LTR, Copia |
RLC_Eugene_42j2-1 |
2610 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3145
| Retrotransposon, LTR, Copia |
RLC_Eugene_AC200834-1 |
1811 |
solo-LTR |
|
Thomas Wicker |
| TREP2264
| Retrotransposon, LTR, Copia |
RLC_Eugene_AF474072-1 |
1690 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3146
| Retrotransposon, LTR, Copia |
RLC_Eugene_AY188333-1 |
8969 |
3'fragment |
|
Thomas Wicker |
| TREP2265
| Retrotransposon, LTR, Copia |
RLC_Eugene_AY663392-1 |
3052 |
fragment |
Triticum aestivum |
Eduard Akhunov |
| TREP3147
| Retrotransposon, LTR, Copia |
RLC_Eugene_consensus-1 |
10088 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2052
| Retrotransposon, LTR, Copia |
RLC_Georgia_AY853252-1 |
1608 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3148
| Retrotransposon, LTR, Copia |
RLC_Gina_M801L24-1 |
6991 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3149
| Retrotransposon, LTR, Copia |
RLC_Giselle_M801L24-3 |
10510 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3150
| Retrotransposon, LTR, Copia |
RLC_Glenda_M801L24-5 |
5035 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3330
| Retrotransposon, LTR, Copia |
RLC_Herman_42j2-1 |
5711 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2079
| Retrotransposon, LTR, Copia |
RLC_Hilda_AY853252-1 |
700 |
fragment of CDS |
Hordeum vulgare |
Marion Roeder |
| TREP1806
| Retrotransposon, LTR, Copia |
RLC_Hopscotch_294D11-1 |
2953 |
fragment of CDS |
Triticum durum |
Thomas Wicker |
| TREP829
| Retrotransposon, LTR, Copia |
RLC_Hopscotch_AY146587-1 |
3153 |
fragment |
Triticum durum |
Thomas Wicker |
| TREP1524
| Retrotransposon, LTR, Copia |
RLC_HORPIA_AY661558-1 |
5032 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP730
| Retrotransposon, LTR, Copia |
RLC_HORPIA2_AF427791-1 |
5111 |
3' end truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP1162
| Retrotransposon, LTR, Copia |
RLC_HORPIA2_AF521177-1 |
5152 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1639
| Retrotransposon, LTR, Copia |
RLC_HORPIA2_AY643843-1 |
4295 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP3331
| Retrotransposon, LTR, Copia |
RLC_Ida_EF540321-1 |
4090 |
5'fragment |
Triticum turgidum |
Jorge Dubcovsky |
| TREP21
| Retrotransposon, LTR, Copia |
RLC_Ikeros_AY013246-1 |
6529 |
complete, non-autonomous |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP2080
| Retrotransposon, LTR, Copia |
RLC_Ikeros_AY853252-2 |
5613 |
3'fragment? |
Hordeum vulgare |
Marion Roeder |
| TREP2016
| Retrotransposon, LTR, Copia |
RLC_Ikya_AY853252-1 |
6838 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2288
| Retrotransposon, LTR, Copia |
RLC_Ikya_EF067844-1 |
6761 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP22
| Retrotransposon, LTR, Copia |
RLC_Inav_AY013246-1 |
5182 |
complete element (5 bp TSD) |
Hordeum vulgare |
Jorge Dubcovsky |
| TREP97
| Retrotransposon, LTR, Copia |
RLC_Inga_AF339051-1 |
952 |
fragment reverse transcriptase |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1435
| Retrotransposon, LTR, Copia |
RLC_Inga_AY268139-1 |
11978 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1527
| Retrotransposon, LTR, Copia |
RLC_Inga_AY661558-2 |
12037 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2289
| Retrotransposon, LTR, Copia |
RLC_Ivana_EF067844-1 |
5083 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2297
| Retrotransposon, LTR, Copia |
RLC_Kasia_EF067844-1 |
5125 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2298
| Retrotransposon, LTR, Copia |
RLC_Lara_EF067844-1 |
735 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2299
| Retrotransposon, LTR, Copia |
RLC_Lara_EF067844-2 |
5146 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2085
| Retrotransposon, LTR, Copia |
RLC_Lena_AY853252-1 |
855 |
int domain CDS |
Hordeum vulgare |
Marion Roeder |
| TREP1423
| Retrotransposon, LTR, Copia |
RLC_Leojyg_AY268139-1 |
4608 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1326
| Retrotransposon, LTR, Copia |
RLC_Liuling_AF459088-1 |
4935 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3151
| Retrotransposon, LTR, Copia |
RLC_Maximus_42j2-1 |
14779 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3152
| Retrotransposon, LTR, Copia |
RLC_Maximus_59e04-1 |
13423 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1645
| Retrotransposon, LTR, Copia |
RLC_Maximus_AY643844-1 |
13785 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP46
| Retrotransposon, LTR, Copia |
RLC_Maximus_BAC-1 |
1091 |
fragment of reverse transcriptase region |
Hordeum vulgare |
Roy Dunford |
| TREP3153
| Retrotransposon, LTR, Copia |
RLC_Maximus_consensus-1 |
14429 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2310
| Retrotransposon, LTR, Copia |
RLC_Maximus_EF067844-1 |
14248 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2311
| Retrotransposon, LTR, Copia |
RLC_Maximus_EF067844-2 |
12949 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2312
| Retrotransposon, LTR, Copia |
RLC_Maximus_EF067844-3 |
14444 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2313
| Retrotransposon, LTR, Copia |
RLC_Maximus_EF067844-4 |
1417 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP3154
| Retrotransposon, LTR, Copia |
RLC_Olivia_42j2-1 |
4939 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1720
| Retrotransposon, LTR, Copia |
RLC_Oref_1020F19-1 |
4982 |
3' end truncated? |
Triticum aestivum |
Thomas Wicker |
| TREP1424
| Retrotransposon, LTR, Copia |
RLC_Oref_AY368673-1 |
5038 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP3332
| Retrotransposon, LTR, Copia |
RLC_Rada_42j2-1 |
504 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3333
| Retrotransposon, LTR, Copia |
RLC_Rada_42j2-2 |
513 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3334
| Retrotransposon, LTR, Copia |
RLC_Rada_42j2-3 |
573 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1536
| Retrotransposon, LTR, Copia |
RLC_Rada_AY661558-1 |
4935 |
degenreated CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP1537
| Retrotransposon, LTR, Copia |
RLC_Rada_AY661558-2 |
1112 |
3'fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP1538
| Retrotransposon, LTR, Copia |
RLC_Rada_AY661558-3 |
4588 |
degenreated CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP1539
| Retrotransposon, LTR, Copia |
RLC_Rada_AY661558-4 |
1114 |
3'fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP2327
| Retrotransposon, LTR, Copia |
RLC_Rita_EF067844-1 |
3921 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3516
| Retrotransposon, LTR, Copia |
RLC_Sasanda_EU157184-1 |
6433 |
complete element |
Triticeae |
Travis Banks |
| TREP1316
| Retrotransposon, LTR, Copia |
RLC_TAR1_AF459088-1 |
6497 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1317
| Retrotransposon, LTR, Copia |
RLC_TAR1_AF459088-2 |
5499 |
5' truncated |
Triticum monococcum |
Jorge Dubcovsky |
| TREP2092
| Retrotransposon, LTR, Copia |
RLC_TAR2_AY853252-1 |
5649 |
3' fragment? |
Hordeum vulgare |
Marion Roeder |
| TREP2093
| Retrotransposon, LTR, Copia |
RLC_TAR2_AY853252-2 |
2131 |
fragment? |
Hordeum vulgare |
Marion Roeder |
| TREP2039
| Retrotransposon, LTR, Copia |
RLC_TAR3_AY853252-1 |
3208 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2040
| Retrotransposon, LTR, Copia |
RLC_TAR4_AY853252-2 |
1608 |
solo-LTR? |
Hordeum vulgare |
Marion Roeder |
| TREP3325
| Retrotransposon, LTR, Copia |
RLC_unnamed_10k23-1 |
642 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3326
| Retrotransposon, LTR, Copia |
RLC_unnamed_42j2-1 |
2879 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3327
| Retrotransposon, LTR, Copia |
RLC_unnamed_42j2-2 |
804 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2377
| Retrotransposon, LTR, Copia |
RLC_unnamed_509D2-1 |
1502 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2254
| Retrotransposon, LTR, Copia |
RLC_unnamed_509D2-2 |
2504 |
|
Hordeum vulgare |
Thomas Wicker |
| TREP79
| Retrotransposon, LTR, Copia |
RLC_unnamed_AJ240088-1 |
209 |
fragment of reverse transciptase |
Secale cereale |
Flavell A.J. |
| TREP2252
| Retrotransposon, LTR, Copia |
RLC_unnamed_EF067844-1 |
1441 |
CDS fragment |
Hordeum vulgare |
Takao Komatsuda |
| TREP2253
| Retrotransposon, LTR, Copia |
RLC_unnamed_EF067844-2 |
3168 |
fragment CDS |
Hordeum vulgare |
Takao Komatsuda |
| TREP41
| Retrotransposon, LTR, Copia |
RLC_unnamed_X85139-1 |
220 |
truncated |
Hordeum chilense |
Ferrer E. |
| TREP704
| Retrotransposon, LTR, Copia |
RLC_Usier_AF474982-1 |
11771 |
complete element |
Hordeum vulgare |
Phillip J. SanMiguel |
| TREP1640
| Retrotransposon, LTR, Copia |
RLC_Usier_AY643843-1 |
5650 |
|
Hordeum vulgare |
Katherine Caldwell |
| TREP1561
| Retrotransposon, LTR, Copia |
RLC_Valerie_AY661558-1 |
700 |
fragment of LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1562
| Retrotransposon, LTR, Copia |
RLC_Valerie_AY661558-2 |
2034 |
3' fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1563
| Retrotransposon, LTR, Copia |
RLC_Valerie_AY661558-3 |
1532 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1564
| Retrotransposon, LTR, Copia |
RLC_Valerie_AY661558-4 |
1404 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1723
| Retrotransposon, LTR, Copia |
RLC_WIS_1020F19-1 |
1761 |
solo-LTR (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1724
| Retrotransposon, LTR, Copia |
RLC_WIS_1020F19-2 |
8507 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP262
| Retrotransposon, LTR, Copia |
RLC_WIS_116F2-4 |
8766 |
complete element |
Triticum monococcum |
|
| TREP2370
| Retrotransposon, LTR, Copia |
RLC_WIS_210J24-1 |
1738 |
solo-LTR |
Triticum urartu |
Eduard Akhunov |
| TREP1823
| Retrotransposon, LTR, Copia |
RLC_WIS_294D11-4 |
8715 |
complete element (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1824
| Retrotransposon, LTR, Copia |
RLC_WIS_294D11-5 |
8672 |
complete element (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1825
| Retrotransposon, LTR, Copia |
RLC_WIS_294D11-6 |
8716 |
complete element (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1826
| Retrotransposon, LTR, Copia |
RLC_WIS_294D11-7 |
8580 |
complete element (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3155
| Retrotransposon, LTR, Copia |
RLC_WIS_42j2-11 |
8482 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3156
| Retrotransposon, LTR, Copia |
RLC_WIS_42j2-3 |
8654 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3157
| Retrotransposon, LTR, Copia |
RLC_WIS_42j2-4 |
8638 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3158
| Retrotransposon, LTR, Copia |
RLC_WIS_42j2-8 |
8736 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3159
| Retrotransposon, LTR, Copia |
RLC_WIS_59e04-1 |
8682 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3160
| Retrotransposon, LTR, Copia |
RLC_WIS_A_consensus-1 |
8670 |
Subfamily A, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP96
| Retrotransposon, LTR, Copia |
RLC_WIS_AF339051-1 |
8740 |
complete element (5 bp TSD) |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1325
| Retrotransposon, LTR, Copia |
RLC_WIS_AF459088-1 |
1724 |
solo LTR |
Triticum monococcum |
Jorge Dubcovsky |
| TREP10
| Retrotransposon, LTR, Copia |
RLC_WIS_AJ304467-1 |
510 |
highly degenerated fragment |
Triticum aestivum |
Muniz L.M. |
| TREP839
| Retrotransposon, LTR, Copia |
RLC_WIS_AY146587-1 |
8744 |
complete element, (5 |
Triticum durum |
Thomas Wicker |
| TREP840
| Retrotransposon, LTR, Copia |
RLC_WIS_AY146587-2 |
8368 |
complete element, (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP841
| Retrotransposon, LTR, Copia |
RLC_WIS_AY146587-3 |
1737 |
solo-LTR, (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP818
| Retrotransposon, LTR, Copia |
RLC_WIS_AY146588-1 |
8748 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP819
| Retrotransposon, LTR, Copia |
RLC_WIS_AY146588-1 |
1749 |
solo-LTR, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1439
| Retrotransposon, LTR, Copia |
RLC_WIS_AY368673-1 |
8622 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1440
| Retrotransposon, LTR, Copia |
RLC_WIS_AY368673-2 |
8542 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1441
| Retrotransposon, LTR, Copia |
RLC_WIS_AY368673-3 |
8711 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1442
| Retrotransposon, LTR, Copia |
RLC_WIS_AY368673-4 |
8668 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1443
| Retrotransposon, LTR, Copia |
RLC_WIS_AY494981-3 |
8638 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3161
| Retrotransposon, LTR, Copia |
RLC_WIS_B_consensus-1 |
8727 |
Subfamily B, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP105
| Retrotransposon, LTR, Copia |
RLC_WIS_X64100-1 |
576 |
fragment 5' UTR and CDS |
Secale cereale |
Thomas Wicker |
| TREP104
| Retrotransposon, LTR, Copia |
RLC_WIS_X64101-1 |
136 |
fragment of reverse transcriptase |
Secale cereale |
Thomas Wicker |
| TREP2012
| Retrotransposon, LTR, Copia |
RLC_Zenia_AY853252-1 |
3600 |
CDS |
Hordeum vulgare |
Marion Roeder |
| TREP2058
| Retrotransposon, LTR, Gypsy |
RLG_BAGY1_AY853252-1 |
1520 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP200
| Retrotransposon, LTR, Gypsy |
RLG_BAGY1_Y14573-1 |
14434 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP206
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_AF254799-1 |
7144 |
3' truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP720
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_AF427791-1 |
8164 |
5' truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP42
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_AJ311202-1 |
969 |
fragment of 5' UTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1622
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_AY643843-1 |
10270 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2003
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_AY853252-1 |
8519 |
ends truncated? |
Hordeum vulgare |
Marion Roeder |
| TREP3162
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_consensus-1 |
10270 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3163
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_M191K21-2 |
10167 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3164
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_M191K21-3 |
9713 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3165
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_M801L24-1 |
10985 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3166
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_M801L24-2 |
1526 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP3167
| Retrotransposon, LTR, Gypsy |
RLG_BAGY2_M801L24-3 |
9711 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3168
| Retrotransposon, LTR, Gypsy |
RLG_Carmilla_9p13-1 |
12996 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3169
| Retrotransposon, LTR, Gypsy |
RLG_Carmilla_consensus-1 |
12988 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3170
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_59e04-1 |
5960 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP616
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077372-1 |
376 |
fragment |
Leymus mollis |
Hisashi Tsujimoto |
| TREP617
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077373-1 |
167 |
fragment |
Leymus mollis |
Hisashi Tsujimoto |
| TREP619
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077374-1 |
453 |
fragment |
Leymus racemosus |
Hisashi Tsujimoto |
| TREP620
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077375-1 |
512 |
fragment |
Leymus racemosus |
Hisashi Tsujimoto |
| TREP621
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077376-1 |
521 |
fragment |
Leymus racemosus |
Hisashi Tsujimoto |
| TREP622
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AB077377-1 |
296 |
fragment |
Triticum aestivum |
Hisashi Tsujimoto |
| TREP98
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AY040832-1 |
7176 |
5' truncated |
Hordeum vulgare |
Hudakova S. |
| TREP99
| Retrotransposon, LTR, Gypsy |
RLG_Cereba_AY040832-2 |
7817 |
5' truncated |
Hordeum vulgare |
Hudakova S. |
| TREP1226
| Retrotransposon, LTR, Gypsy |
RLG_Danae_231A16-1 |
11117 |
complete element |
Triticum monococcum |
|
| TREP2208
| Retrotransposon, LTR, Gypsy |
RLG_Danae_464G14-1 |
1438 |
3' fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3171
| Retrotransposon, LTR, Gypsy |
RLG_Danae_59e04-1 |
10997 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1408
| Retrotransposon, LTR, Gypsy |
RLG_Danae_AY494981-1 |
11258 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3457
| Retrotransposon, LTR, Gypsy |
RLG_Danae_consensus-1 |
11262 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP231
| Retrotransposon, LTR, Gypsy |
RLG_Daniela_AF326781-1 |
13276 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP796
| Retrotransposon, LTR, Gypsy |
RLG_Daniela_AY146588-1 |
8301 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3172
| Retrotransposon, LTR, Gypsy |
RLG_Derami_A_AY188333-1 |
6272 |
5'fragment |
|
Thomas Wicker |
| TREP3173
| Retrotransposon, LTR, Gypsy |
RLG_Derami_AY368673-1 |
6684 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP2258
| Retrotransposon, LTR, Gypsy |
RLG_Egug_103H9-1 |
574 |
5' truncated |
Triticum durum |
Thomas Wicker |
| TREP3175
| Retrotransposon, LTR, Gypsy |
RLG_Egug_10k23-1 |
1536 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP3176
| Retrotransposon, LTR, Gypsy |
RLG_Egug_AY268139-1 |
7295 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3177
| Retrotransposon, LTR, Gypsy |
RLG_Egug_AY368673-1 |
7207 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP3174
| Retrotransposon, LTR, Gypsy |
RLG_Egug_EF067844-16 |
7398 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP1228
| Retrotransposon, LTR, Gypsy |
RLG_Erika_231A16-2 |
14116 |
complete element |
Triticum monococcum |
|
| TREP2261
| Retrotransposon, LTR, Gypsy |
RLG_Erika_643D12-1 |
13982 |
complete element |
Triticum durum |
Eduard Akhunov |
| TREP2262
| Retrotransposon, LTR, Gypsy |
RLG_Erika_643D12-2 |
926 |
truncated |
Triticum durum |
Eduard Akhunov |
| TREP234
| Retrotransposon, LTR, Gypsy |
RLG_Erika_AF326781-1 |
14146 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1305
| Retrotransposon, LTR, Gypsy |
RLG_Erika_AF459088-1 |
14207 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1323
| Retrotransposon, LTR, Gypsy |
RLG_Erika_AF459088-2 |
4107 |
solo LTR |
Triticum monococcum |
Jorge Dubcovsky |
| TREP55
| Retrotransposon, LTR, Gypsy |
RLG_Erika_AJ270051-1 |
417 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP1412
| Retrotransposon, LTR, Gypsy |
RLG_Erika_AY494981-2 |
13656 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3178
| Retrotransposon, LTR, Gypsy |
RLG_Erika_consensus-1 |
14077 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2266
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_103H9-1 |
9999 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3179
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-10 |
9985 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3190
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-2 |
6198 |
3'fragment, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3191
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-3 |
9132 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3192
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-4 |
5863 |
3'fragment, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3193
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-5 |
9108 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3180
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-6 |
10008 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3181
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-7 |
10034 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3194
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-8 |
8560 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3182
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_10k23-9 |
9463 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3183
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_231A16-1 |
9914 |
complete element |
|
Thomas Wicker |
| TREP3184
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_42j2-1 |
9999 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3195
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_42j2-3 |
9045 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3185
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_59e04-1 |
7462 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3196
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_59e04-3 |
6201 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3186
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_609E6-2 |
2199 |
3'fragment |
|
Thomas Wicker |
| TREP3187
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_9p13-1 |
10061 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3188
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_9p13-2 |
10038 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3197
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_9p13-3 |
8653 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP828
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_AY146587-2 |
8692 |
3' truncated |
Triticum durum |
Thomas Wicker |
| TREP1413
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_AY368673-1 |
10011 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1415
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_AY494981-2 |
10028 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP252
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_116F2-1 |
4304 |
non-autonomous, fragment of 5' region |
Triticum monococcum |
|
| TREP2267
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_210J24-1 |
1431 |
non-autonomous, 5' truncated |
Triticum urartu |
Eduard Akhunov |
| TREP1230
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_231A16-2 |
2258 |
non-autonomous, fragment |
Triticum monococcum |
|
| TREP1804
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_294D11-2 |
8563 |
non-autonomous, complete element (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP2209
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_464G14-1 |
3346 |
non-autonomous, 3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP1231
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_609E6-1 |
8846 |
non-autonomous, 3' truncated |
Triticum monococcum |
|
| TREP2268
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_643D12-1 |
9211 |
non-autonomous, complete element |
Triticum durum |
Eduard Akhunov |
| TREP2269
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_643D12-2 |
6503 |
non-autonomous, 3' truncated |
Triticum durum |
Eduard Akhunov |
| TREP235
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_AF326781-1 |
9097 |
non-autonomous, complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1306
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_AF459088-1 |
9916 |
non-autonomous, complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP827
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_AY146587-1 |
4158 |
non-autonomous, fragment |
Triticum durum |
Thomas Wicker |
| TREP1414
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_AY494981-1 |
9087 |
non-autonomous, complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3198
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_B_consensus-1 |
9099 |
consensus sequence, non-autonomous, subfamily
B |
Triticeae |
Thomas Wicker |
| TREP3189
| Retrotransposon, LTR, Gypsy |
RLG_Fatima_consensus-1 |
10000 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3199
| Retrotransposon, LTR, Gypsy |
RLG_Geneva_consensus-1 |
20112 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3200
| Retrotransposon, LTR, Gypsy |
RLG_Geneva_M801L24-1 |
54107 |
recombined tandem |
Hordeum vulgare |
Thomas Wicker |
| TREP3201
| Retrotransposon, LTR, Gypsy |
RLG_Haight_773C20-1 |
14137 |
5'fragment |
|
Thomas Wicker |
| TREP1637
| Retrotransposon, LTR, Gypsy |
RLG_Haight_AY643844-1 |
13060 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2282
| Retrotransposon, LTR, Gypsy |
RLG_Haight_EF067844-1 |
12053 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP1417
| Retrotransposon, LTR, Gypsy |
RLG_Hawi_AY494981-1 |
11691 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP798
| Retrotransposon, LTR, Gypsy |
RLG_Heidi_AY146588-1 |
1586 |
solo-LTR, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2283
| Retrotransposon, LTR, Gypsy |
RLG_HORGY_103H9-1 |
2167 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP728
| Retrotransposon, LTR, Gypsy |
RLG_HORGY_AF427791-1 |
4354 |
degenerated |
Hordeum vulgare |
Thomas Wicker |
| TREP1638
| Retrotransposon, LTR, Gypsy |
RLG_HORGY_AY643844-1 |
3087 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP3202
| Retrotransposon, LTR, Gypsy |
RLG_Ifis_59e04-1 |
8027 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2286
| Retrotransposon, LTR, Gypsy |
RLG_Ifis_643D12-1 |
524 |
5' truncated |
Triticum durum |
Eduard Akhunov |
| TREP2287
| Retrotransposon, LTR, Gypsy |
RLG_Ifis_643D12-2 |
544 |
truncated |
Triticum durum |
Eduard Akhunov |
| TREP1418
| Retrotransposon, LTR, Gypsy |
RLG_Ifis_AY368673-1 |
11020 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP1528
| Retrotransposon, LTR, Gypsy |
RLG_Jela_AY661558-1 |
8076 |
LARD, complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1711
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_1020F19-1 |
12992 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1308
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AF459088-1 |
12565 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1309
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AF459088-2 |
12470 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1620
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY643842-1 |
8278 |
fragment |
Hordeum vulgare |
Katherine Caldwell |
| TREP1621
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY643844-2 |
12141 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1529
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY661558-1 |
12138 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1530
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY661558-2 |
2274 |
tandem-2 |
Hordeum vulgare |
Thomas Wicker |
| TREP1531
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY661558-3 |
11962 |
tandem-1 |
Hordeum vulgare |
Thomas Wicker |
| TREP1532
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY661558-4 |
2268 |
3'fragent of tandem-2 |
Hordeum vulgare |
Thomas Wicker |
| TREP1533
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_AY661558-5 |
11892 |
tandem-1 |
Hordeum vulgare |
Thomas Wicker |
| TREP3458
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_consensus-1 |
12268 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2293
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_EF067844-1 |
6877 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2294
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_EF067844-2 |
8028 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2295
| Retrotransposon, LTR, Gypsy |
RLG_Jeli_EF067844-3 |
6548 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP40
| Retrotransposon, LTR, Gypsy |
RLG_Jody_X70051-1 |
1542 |
fragment of LTR |
Hordeum chilense |
Ferrer E. |
| TREP1714
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_1020F19-2 |
8067 |
3' end |
Triticum aestivum |
Thomas Wicker |
| TREP3203
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_10k23-1 |
13068 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3204
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_10k23-2 |
6793 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP254
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_115G1-1 |
4827 |
fragment of 3' region |
Triticum monococcum |
|
| TREP253
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_116F2-1 |
9806 |
3'fragment |
Triticum monococcum |
|
| TREP1235
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_231A16-1 |
2276 |
fragment |
Triticum monococcum |
|
| TREP2213
| Retrotransposon, LTR, Gypsy |
RLG_Latidu_464G14-1 |
2404 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP1715
| Retrotransposon, LTR, Gypsy |
RLG_Laura_1020F19-1 |
14089 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1716
| Retrotransposon, LTR, Gypsy |
RLG_Laura_1020F19-2 |
13040 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP2302
| Retrotransposon, LTR, Gypsy |
RLG_Laura_103H9-1 |
12428 |
complete element, non-autonomous |
Triticum durum |
Thomas Wicker |
| TREP3210
| Retrotransposon, LTR, Gypsy |
RLG_Laura_10k23-1 |
12215 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3211
| Retrotransposon, LTR, Gypsy |
RLG_Laura_10k23-2 |
8191 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP1223
| Retrotransposon, LTR, Gypsy |
RLG_Laura_231A16-1 |
3112 |
fragment of LTR |
Triticum monococcum |
|
| TREP3205
| Retrotransposon, LTR, Gypsy |
RLG_Laura_42j2-1 |
14281 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3206
| Retrotransposon, LTR, Gypsy |
RLG_Laura_59e04-1 |
4476 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3207
| Retrotransposon, LTR, Gypsy |
RLG_Laura_59e04-2 |
4085 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1236
| Retrotransposon, LTR, Gypsy |
RLG_Laura_609E6-1 |
12413 |
complete element, non-autonomous |
Triticum monococcum |
|
| TREP1237
| Retrotransposon, LTR, Gypsy |
RLG_Laura_609E6-2 |
1472 |
3' fragment of LTR |
Triticum monococcum |
|
| TREP1238
| Retrotransposon, LTR, Gypsy |
RLG_Laura_719C13-1 |
14260 |
complete element |
Triticum monococcum |
|
| TREP3208
| Retrotransposon, LTR, Gypsy |
RLG_Laura_9p13-1 |
13133 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP54
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AJ270052-1 |
420 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP1419
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY368673-1 |
12374 |
complete element, non-autonomous |
Triticum turgidum |
Thomas Wicker |
| TREP1420
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY494981-1 |
13064 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP1421
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY494981-2 |
10490 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP1422
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY494981-3 |
9861 |
complete element, non-autonomous |
Triticum turgidum |
Eduard Akhunov |
| TREP1534
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY661558-1 |
8907 |
3'fragment comp CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP2017
| Retrotransposon, LTR, Gypsy |
RLG_Laura_AY853252-1 |
4060 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3209
| Retrotransposon, LTR, Gypsy |
RLG_Laura_consensus-1 |
14059 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3212
| Retrotransposon, LTR, Gypsy |
RLG_Laura_DQ767625-1 |
12162 |
complete element, non-autonomous |
|
Thomas Wicker |
| TREP2300
| Retrotransposon, LTR, Gypsy |
RLG_Laura_EF067844-1 |
4021 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP2301
| Retrotransposon, LTR, Gypsy |
RLG_Laura_EF067844-2 |
14327 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3336
| Retrotransposon, LTR, Gypsy |
RLG_Lila_42j2-3 |
13023 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3213
| Retrotransposon, LTR, Gypsy |
RLG_Lisa_10k23-1 |
14678 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3214
| Retrotransposon, LTR, Gypsy |
RLG_Lisa_64a5-1 |
14678 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1644
| Retrotransposon, LTR, Gypsy |
RLG_Lolaog_AY643843-1 |
10708 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2305
| Retrotransposon, LTR, Gypsy |
RLG_Lolaog_EF067844-1 |
8809 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2316
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_103H9-1 |
3334 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP2317
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_103H9-2 |
9592 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3215
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_10k23-1 |
5447 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3216
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_10k23-2 |
3251 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3217
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_10k23-3 |
875 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP3218
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_10k23-4 |
918 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP257
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_116F2-1 |
7803 |
fragment |
Triticum monococcum |
|
| TREP2318
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_AY494981-1 |
7697 |
complete element |
Triticum durum |
Eduard Akhunov |
| TREP3337
| Retrotransposon, LTR, Gypsy |
RLG_Nusif_B_10k23-1 |
7827 |
5'fragment, subfamily B |
Triticum aestivum |
Thomas Wicker |
| TREP3219
| Retrotransposon, LTR, Gypsy |
RLG_Olivia_10k23-1 |
5897 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3220
| Retrotransposon, LTR, Gypsy |
RLG_OsTaz_consensus-1 |
6361 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3338
| Retrotransposon, LTR, Gypsy |
RLG_Quinta_10k23-1 |
4728 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP1312
| Retrotransposon, LTR, Gypsy |
RLG_Romana_AF459088-2 |
10370 |
complete element, non-autonomous |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1425
| Retrotransposon, LTR, Gypsy |
RLG_Romana_AY494981-1 |
10202 |
complete element, non-autonomous |
Triticum turgidum |
Eduard Akhunov |
| TREP3221
| Retrotransposon, LTR, Gypsy |
RLG_Romani_10k23-1 |
3583 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3222
| Retrotransposon, LTR, Gypsy |
RLG_Romani_10k23-2 |
2740 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP3223
| Retrotransposon, LTR, Gypsy |
RLG_Romani_10k23-3 |
10868 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2328
| Retrotransposon, LTR, Gypsy |
RLG_Romani_210J24-1 |
10209 |
complete element |
Triticum urartu |
Eduard Akhunov |
| TREP1311
| Retrotransposon, LTR, Gypsy |
RLG_Romani_AF459088-1 |
10919 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1242
| Retrotransposon, LTR, Gypsy |
RLG_Romani_AY188331-1 |
5127 |
3' truncated |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3224
| Retrotransposon, LTR, Gypsy |
RLG_Romani_B_10k23-4 |
9887 |
complete element, non-autonomous subfamily B |
Triticum aestivum |
Thomas Wicker |
| TREP3225
| Retrotransposon, LTR, Gypsy |
RLG_Romani_B_64a5-1 |
9886 |
complete element, non-autonomous subfamily B |
Triticum aestivum |
Thomas Wicker |
| TREP3226
| Retrotransposon, LTR, Gypsy |
RLG_Sabine_M801L24-1 |
7190 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1722
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_1020F19-1 |
5633 |
complete element (5 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP3229
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_103H9-1 |
8479 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3230
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_109N23-1 |
7256 |
complete element |
|
Thomas Wicker |
| TREP1605
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_109N23-2 |
811 |
solo-LTR |
Triticum monococcum |
|
| TREP259
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_115G1-1 |
10255 |
complete element |
Triticum monococcum |
|
| TREP261
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_116F2-1 |
6129 |
fragment of 3' region |
Triticum monococcum |
|
| TREP2341
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_210J24-1 |
5214 |
5' truncated |
Triticum urartu |
Eduard Akhunov |
| TREP3231
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_42j2-3 |
8286 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3232
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_42j2-7 |
8269 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2218
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_464G14-1 |
6764 |
complete element (5 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2219
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_464G14-2 |
2196 |
3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2220
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_464G14-3 |
1846 |
3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2343
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_643D12-1 |
5989 |
5' truncated |
Triticum durum |
Eduard Akhunov |
| TREP2344
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_643D12-2 |
1082 |
solo-LTR |
Triticum durum |
Eduard Akhunov |
| TREP3235
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF427791-1 |
8032 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP709
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF474371-1 |
6846 |
complete element |
Hordeum vulgare |
|
| TREP3233
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF474371-1 |
8317 |
complete element |
|
Thomas Wicker |
| TREP3234
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF474371-3 |
8258 |
complete element |
|
Thomas Wicker |
| TREP713
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF474372-1 |
6949 |
complete element |
Hordeum vulgare |
|
| TREP714
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF474372-2 |
1527 |
solo-LTR |
Hordeum vulgare |
|
| TREP1471
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AF497474-2 |
870 |
fragment |
Aegilops tauschii |
Yong Qiang Gu |
| TREP835
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146587-1 |
2547 |
degenerated |
Triticum durum |
Thomas Wicker |
| TREP836
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146587-2 |
5391 |
3' truncated |
Triticum durum |
Thomas Wicker |
| TREP837
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146587-3 |
6739 |
5' truncated |
Triticum durum |
Thomas Wicker |
| TREP838
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146587-4 |
3292 |
fragment of 3' region |
Triticum durum |
Thomas Wicker |
| TREP807
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146588-1 |
4723 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP809
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146588-1 |
4680 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP811
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146588-1 |
2579 |
both ends truncated |
Triticum monococcum |
Thomas Wicker |
| TREP812
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146588-2 |
7088 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP810
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY146588-3 |
6831 |
3' truncated |
Triticum monococcum |
Thomas Wicker |
| TREP1473
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY368673-2 |
1730 |
fragment |
Triticum turgidum |
Thomas Wicker |
| TREP1430
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY494981-2 |
7300 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3236
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY494981-3 |
8296 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3237
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY643843-1 |
8000 |
complete element |
Hordeum vulgare |
Katherine Caldwell |
| TREP3238
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY643844-2 |
8183 |
complete element |
Hordeum vulgare |
Katherine Caldwell |
| TREP2029
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY853252-1 |
3670 |
5' fragment DR at end |
Hordeum vulgare |
Marion Roeder |
| TREP2030
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY853252-2 |
1326 |
fragment DR at end |
Hordeum vulgare |
Marion Roeder |
| TREP2031
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY853252-3 |
137 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2088
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_AY853252-4 |
7990 |
ends truncated? |
Hordeum vulgare |
Marion Roeder |
| TREP3244
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_B_AF497474-1 |
7033 |
complete element, non-autonomous |
Aegilops tauschii |
Yong Qiang Gu |
| TREP3245
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_B_AY368673-1 |
7108 |
complete element, non-autonomous |
Triticum turgidum |
Thomas Wicker |
| TREP3242
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_B_EF067844-13 |
7022 |
complete element, non-autonomous |
Hordeum vulgare |
Takao Komatsuda |
| TREP3243
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_B_EF067844-17 |
7013 |
complete element, non-autonomous |
Hordeum vulgare |
Takao Komatsuda |
| TREP3246
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_C_210J24-2 |
8090 |
complete element, non-autonomous |
|
Eduard Akhunov |
| TREP3247
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_C_231A16-1 |
7924 |
complete element, non-autonomous |
|
Thomas Wicker |
| TREP3248
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_C_AY494981-4 |
9075 |
complete element, non-autonomous |
Triticum turgidum |
Eduard Akhunov |
| TREP3249
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_C_M801L24-5 |
1623 |
solo-LTR, non-autonomous |
Hordeum vulgare |
Thomas Wicker |
| TREP3239
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_consensus-1 |
8055 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3250
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_D_115G1-2 |
7523 |
complete element, non-autonomous |
|
Thomas Wicker |
| TREP3251
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_D_AY146588-2 |
7300 |
complete element, non-autonomous |
|
Thomas Wicker |
| TREP3252
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_D_AY146588-2 |
7078 |
complete element, non-autonomous |
Triticum monococcum |
Thomas Wicker |
| TREP2329
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-10 |
1210 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3227
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-12 |
8064 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2332
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-14 |
1137 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP3228
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-18 |
8056 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2337
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-4 |
1500 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2338
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-5 |
6828 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2339
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_EF067844-6 |
1636 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP3240
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_M191K21-2 |
7427 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3241
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_M801L24-3 |
8188 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP108
| Retrotransposon, LTR, Gypsy |
RLG_Sabrina_U76261-1 |
2412 |
fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP3254
| Retrotransposon, LTR, Gypsy |
RLG_Sakura_10k23-4 |
7321 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3339
| Retrotransposon, LTR, Gypsy |
RLG_Sakura_115G1-1 |
7490 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP3253
| Retrotransposon, LTR, Gypsy |
RLG_Sakura_EF067844-19 |
7501 |
3'fragment |
Hordeum vulgare |
Takao Komatsuda |
| TREP209
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AF254799-2 |
5609 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP740
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AF427791-1 |
5408 |
ends truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP1551
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AY661558-2 |
5672 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1553
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AY661558-4 |
5061 |
5'fragment of LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1555
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AY661558-6 |
4307 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1556
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_AY661558-7 |
16268 |
complete element (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2347
| Retrotransposon, LTR, Gypsy |
RLG_Sukkula_EF067844-2 |
3986 |
solo-LTR |
Hordeum vulgare |
Takao Komatsuda |
| TREP3255
| Retrotransposon, LTR, Gypsy |
RLG_Sumana_10k23-1 |
11899 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3256
| Retrotransposon, LTR, Gypsy |
RLG_Sumana_59e04-2 |
11900 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2348
| Retrotransposon, LTR, Gypsy |
RLG_Sumana_643D12-1 |
2814 |
solo-LTR |
Triticum durum |
Eduard Akhunov |
| TREP2349
| Retrotransposon, LTR, Gypsy |
RLG_Sumana_643D12-2 |
11601 |
complete element |
Triticum durum |
Eduard Akhunov |
| TREP3459
| Retrotransposon, LTR, Gypsy |
RLG_Sumana_consensus-1 |
11900 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP258
| Retrotransposon, LTR, Gypsy |
RLG_Sumaya_116F2-1 |
13551 |
complete element, (5 bp TSD) |
Triticum monococcum |
|
| TREP1240
| Retrotransposon, LTR, Gypsy |
RLG_Sumaya_231A16-2 |
4525 |
fragment |
Triticum monococcum |
|
| TREP3257
| Retrotransposon, LTR, Gypsy |
RLG_Sumaya_59e04-1 |
12795 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP208
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AF254799-1 |
4960 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1314
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AF459088-1 |
4015 |
solo LTR |
Triticum monococcum |
Jorge Dubcovsky |
| TREP715
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AF474372-1 |
4895 |
solo-LTR |
Hordeum vulgare |
|
| TREP1648
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY643843-1 |
4971 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1649
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY643843-2 |
4854 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1550
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY661558-1 |
3224 |
fragment both ends truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP3258
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY661558-2 |
4738 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1552
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY661558-3 |
3040 |
fragment of LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1554
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY661558-5 |
12808 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2038
| Retrotransposon, LTR, Gypsy |
RLG_Surya_AY853252-1 |
2009 |
3'end |
Hordeum vulgare |
Marion Roeder |
| TREP2346
| Retrotransposon, LTR, Gypsy |
RLG_Surya_EF067844-1 |
7400 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3259
| Retrotransposon, LTR, Gypsy |
RLG_Surya_M191K21-1 |
13088 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3260
| Retrotransposon, LTR, Gypsy |
RLG_Surya_M191K21-2 |
13038 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3261
| Retrotransposon, LTR, Gypsy |
RLG_Surya_M801L24-1 |
4855 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1213
| Retrotransposon, LTR, Gypsy |
RLG_Surya_TREP1213-1 |
7920 |
fragment of 5' region |
Hordeum marinum |
|
| TREP1214
| Retrotransposon, LTR, Gypsy |
RLG_Surya_TREP1214-1 |
7586 |
fragment of 5' region |
Hordeum marinum |
|
| TREP1215
| Retrotransposon, LTR, Gypsy |
RLG_Surya_TREP1215-1 |
7731 |
fragment of 5' region |
Hordeum patagonicum |
|
| TREP1216
| Retrotransposon, LTR, Gypsy |
RLG_Surya_TREP1216-1 |
7568 |
fragment of 5' region |
Hordeum vulgare |
|
| TREP1217
| Retrotransposon, LTR, Gypsy |
RLG_Surya_TREP1217-1 |
11864 |
complete element |
Hordeum vulgare |
|
| TREP102
| Retrotransposon, LTR, Gypsy |
RLG_Surya_Z17327-1 |
3140 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP3335
| Retrotransposon, LTR, Gypsy |
RLG_unnamed_59e04-4 |
1140 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP69
| Retrotransposon, LTR, Gypsy |
RLG_unnamed_AF222021-1 |
3984 |
fragment of 5' region |
Secale cereale |
PlantSat |
| TREP57
| Retrotransposon, LTR, Gypsy |
RLG_unnamed_AJ270049-1 |
416 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP56
| Retrotransposon, LTR, Gypsy |
RLG_unnamed_AJ270050-1 |
410 |
fragment of reverse transcriptase |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP2275
| Retrotransposon, LTR, Gypsy |
RLG_unnamed_EF067844-1 |
2693 |
fragment |
Hordeum vulgare |
Takao Komatsuda |
| TREP1642
| Retrotransposon, LTR, Gypsy |
RLG_Vagabond_AY643844-1 |
13930 |
complete element (6 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2357
| Retrotransposon, LTR, Gypsy |
RLG_Vagabond_EF067844-1 |
11791 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3263
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_10k23-1 |
8034 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3264
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_10k23-4 |
9497 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3265
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_10k23-5 |
9624 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP263
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_115G1-1 |
9563 |
complete element |
Triticum monococcum |
|
| TREP264
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_115G1-2 |
9589 |
complete element |
Triticum monococcum |
|
| TREP265
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_116F2-1 |
9609 |
complete element |
Triticum monococcum |
|
| TREP2364
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_210J24-1 |
2778 |
3' truncated |
Triticum urartu |
Eduard Akhunov |
| TREP1243
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_231A16-1 |
8192 |
3' truncated |
Triticum monococcum |
|
| TREP2224
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_464G14-1 |
8818 |
5'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3266
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_59e04-1 |
9565 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3267
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_59e04-2 |
9463 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1244
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_609E6-1 |
8731 |
3' truncated |
Triticum monococcum |
|
| TREP2365
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_643D12-1 |
6582 |
5' truncated |
Triticum durum |
Eduard Akhunov |
| TREP49
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_993T7-1 |
831 |
5' fragment of CDS |
Hordeum vulgare |
|
| TREP3268
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_9p13-1 |
6994 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP1320
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AF459088-1 |
9614 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1321
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AF459088-2 |
9487 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP716
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AF474372-1 |
9397 |
complete element |
Hordeum vulgare |
|
| TREP717
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AF474372-2 |
1416 |
solo-LTR |
Hordeum vulgare |
|
| TREP109
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AJ270056-1 |
590 |
fragment |
Hordeum vulgare |
Heslop-Harrison J.S. |
| TREP817
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY146588-1 |
9586 |
5' end truncated |
Triticum monococcum |
Thomas Wicker |
| TREP815
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY146588-2 |
7234 |
ends truncated |
Triticum monococcum |
Thomas Wicker |
| TREP1437
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY268139-3 |
9812 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2048
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY853252-1 |
1408 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2105
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY853252-1 |
1447 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2049
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_AY853252-2 |
9238 |
complete element (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3269
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_consensus-1 |
9445 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2359
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_EF067844-1 |
9311 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3262
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_EF067844-2 |
9002 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2361
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_EF067844-3 |
5215 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2362
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_EF067844-4 |
213 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2363
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_EF067844-5 |
8983 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP50
| Retrotransposon, LTR, Gypsy |
RLG_WHAM_GIR-1 |
633 |
fragment of 3' region |
Hordeum vulgare |
|
| TREP3340
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_10k23-2 |
1525 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP3341
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_42j2-3 |
5442 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP822
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_435N11-1 |
1122 |
fragment of LTR |
Triticum monococcum |
|
| TREP2369
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_643D12-1 |
884 |
3' truncated |
Triticum durum |
Eduard Akhunov |
| TREP842
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_AY146587-1 |
1528 |
solo-LTR, (5 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP820
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_AY146588-1 |
1149 |
fragment of LTR |
Triticum monococcum |
Thomas Wicker |
| TREP821
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_AY146588-3 |
12891 |
complete element, (5 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1438
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_AY494981-2 |
10158 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP2366
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_EF067844-1 |
1177 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2367
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_EF067844-2 |
1979 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2368
| Retrotransposon, LTR, Gypsy |
RLG_Wilma_EF067844-3 |
825 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2210
| Retrotransposon, LTR, Gypsy |
RLG_Yasmin_464G14-1 |
158 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2375
| Retrotransposon, LTR, Gypsy |
RLG_Zuhra_103H9-1 |
3256 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP3270
| Retrotransposon, LTR, unknown |
RLX_Artem_42j2-1 |
2527 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3271
| Retrotransposon, LTR, unknown |
RLX_Artem_42j2-2 |
2340 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3272
| Retrotransposon, LTR, unknown |
RLX_Artem_AF459088-1 |
2506 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3273
| Retrotransposon, LTR, unknown |
RLX_Artem_consensus-1 |
2546 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3520
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538603-1 |
732 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3521
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538604-1 |
810 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3522
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538605-1 |
722 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3523
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538606-1 |
737 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3524
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538607-1 |
733 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3525
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538608-1 |
732 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3526
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AF538609-1 |
734 |
complete element |
Triticeae |
Thomas Wicker |
| TREP1400
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AY164585-1 |
725 |
complete element |
Hordeum vulgare |
Ruslan Kalendar |
| TREP1650
| Retrotransposon, LTR, unknown |
RLX_Cassandra_AY643843-1 |
735 |
complete element (5 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP3527
| Retrotransposon, LTR, unknown |
RLX_Cassandra_consensus-1 |
734 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2356
| Retrotransposon, LTR, unknown |
RLX_Cassandra_EF067844-1 |
213 |
3' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP251
| Retrotransposon, LTR, unknown |
RLX_Eway_115G1-1 |
1986 |
complete element (5 bp TSD) |
Triticum monococcum |
|
| TREP3274
| Retrotransposon, LTR, unknown |
RLX_Ginger_10k23-1 |
12229 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2274
| Retrotransposon, LTR, unknown |
RLX_Gujog_103H9-1 |
4238 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3275
| Retrotransposon, LTR, unknown |
RLX_Gujog_10k23-1 |
1604 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3276
| Retrotransposon, LTR, unknown |
RLX_Gujog_10k23-3 |
5698 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3277
| Retrotransposon, LTR, unknown |
RLX_Gujog_59e04-1 |
5296 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1416
| Retrotransposon, LTR, unknown |
RLX_Gujog_AY494981-1 |
5800 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP3278
| Retrotransposon, LTR, unknown |
RLX_Martin_EF540321-1 |
1971 |
complete element |
Triticum turgidum |
Jorge Dubcovsky |
| TREP3279
| Retrotransposon, LTR, unknown |
RLX_Michelle_10k23-1 |
1392 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3280
| Retrotransposon, LTR, unknown |
RLX_Michelle_64a5-1 |
1392 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3342
| Retrotransposon, LTR, unknown |
RLX_Ronda_42j2-2 |
2012 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2306
| Retrotransposon, LTR, unknown |
RLX_unnamed_509D2-1 |
199 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP2307
| Retrotransposon, LTR, unknown |
RLX_unnamed_509D2-2 |
198 |
solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP3343
| Retrotransposon, LTR, unknown |
RLX_Varna_42j2-1 |
8632 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP255
| Retrotransposon, LTR, unknown |
RLX_Veju_116F2-1 |
2530 |
complete element (5 bp TSD) |
Triticum monococcum |
|
| TREP1822
| Retrotransposon, LTR, unknown |
RLX_Veju_294D11-1 |
1119 |
3' fragment |
Triticum durum |
Thomas Wicker |
| TREP2046
| Retrotransposon, LTR, unknown |
RLX_Veju_AY853252-1 |
396 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2047
| Retrotransposon, LTR, unknown |
RLX_Veju_AY853252-2 |
396 |
solo-LTR (5 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1571
| Retrotransposon, LTR, unknown |
RLX_Xalas_AY661558-1 |
3866 |
complete element, solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1572
| Retrotransposon, LTR, unknown |
RLX_Xalas_AY661558-2 |
3677 |
complete element, solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1573
| Retrotransposon, LTR, unknown |
RLX_Xalas_AY661558-3 |
3865 |
complete element, solo-LTR |
Hordeum vulgare |
Thomas Wicker |
| TREP1574
| Retrotransposon, LTR, unknown |
RLX_Xalas_AY661558-4 |
3344 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1575
| Retrotransposon, LTR, unknown |
RLX_Xalas_AY661558-5 |
3677 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3344
| Retrotransposon, LTR, unknown |
RLX_Xalax_10k23-1 |
4101 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP3345
| Retrotransposon, LTR, unknown |
RLX_Xalax_9p13-1 |
4233 |
solo-LTR |
Triticum aestivum |
Thomas Wicker |
| TREP1581
| Retrotransposon, LTR, unknown |
RLX_Xalax_AY368673-1 |
4400 |
complete element, solo-LTR |
|
Thomas Wicker |
| TREP1633
| Retrotransposon, SINE, unknown |
SIX_Dido_AY643843-1 |
256 |
putative |
Hordeum vulgare |
Katherine Caldwell |
|
| Unclassified |
|
| Accession |
Classification |
Family name |
Size |
Comment |
Organism |
Submitted by |
| TREP2256
| unknown, unknown, unknown |
XXX_Demeter_210J24-1 |
687 |
|
Triticum urartu |
Eduard Akhunov |
| TREP2257
| unknown, unknown, unknown |
XXX_Demeter_210J24-2 |
687 |
|
Triticum urartu |
Eduard Akhunov |
| TREP3283
| unknown, unknown, unknown |
XXX_Ecoli_transposon-1 |
1335 |
complete element? |
E. coli |
Thomas Wicker |
| TREP3284
| unknown, unknown, unknown |
XXX_Ecoli_transposon-2 |
769 |
complete element? |
E. coli |
Thomas Wicker |
| TREP2013
| unknown, unknown, unknown |
XXX_Emma_AY853252-1 |
641 |
similar TREP1218
| Hordeum vulgare |
Marion Roeder |
| TREP2259
| unknown, unknown, unknown |
XXX_Enuc_103H9-1 |
658 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP3286
| unknown, unknown, unknown |
XXX_Horus_10k23-1 |
3981 |
complete element? |
Triticum aestivum |
Thomas Wicker |
| TREP2284
| unknown, unknown, unknown |
XXX_Iapetus_103H9-1 |
262 |
|
Triticum durum |
Thomas Wicker |
| TREP245
| unknown, unknown, unknown |
XXX_Ladon_AF325198-1 |
195 |
repeats of conserved 17 bp
motive |
Triticum aestivum |
Thomas Wicker |
| TREP1816
| unknown, unknown, unknown |
XXX_Milton_294D11-1 |
4420 |
complete element? |
Triticum durum |
Thomas Wicker |
| TREP2022
| unknown, unknown, unknown |
XXX_Nancy_AY853252-1 |
929 |
similart TREP1218
| Hordeum vulgare |
Marion Roeder |
| TREP516
| unknown, unknown, unknown |
XXX_SCEN_AB008941-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP527
| unknown, unknown, unknown |
XXX_SCEN_AB008942-1 |
125 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP531
| unknown, unknown, unknown |
XXX_SCEN_AB008943-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP532
| unknown, unknown, unknown |
XXX_SCEN_AB008944-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP533
| unknown, unknown, unknown |
XXX_SCEN_AB008945-1 |
131 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP534
| unknown, unknown, unknown |
XXX_SCEN_AB008946-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP535
| unknown, unknown, unknown |
XXX_SCEN_AB008947-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP536
| unknown, unknown, unknown |
XXX_SCEN_AB008948-1 |
139 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP537
| unknown, unknown, unknown |
XXX_SCEN_AB008949-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP517
| unknown, unknown, unknown |
XXX_SCEN_AB008950-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP518
| unknown, unknown, unknown |
XXX_SCEN_AB008951-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP519
| unknown, unknown, unknown |
XXX_SCEN_AB008952-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP520
| unknown, unknown, unknown |
XXX_SCEN_AB008953-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP521
| unknown, unknown, unknown |
XXX_SCEN_AB008954-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP522
| unknown, unknown, unknown |
XXX_SCEN_AB008955-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP523
| unknown, unknown, unknown |
XXX_SCEN_AB008956-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP524
| unknown, unknown, unknown |
XXX_SCEN_AB008957-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP525
| unknown, unknown, unknown |
XXX_SCEN_AB008958-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP526
| unknown, unknown, unknown |
XXX_SCEN_AB008959-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP528
| unknown, unknown, unknown |
XXX_SCEN_AB008960-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP529
| unknown, unknown, unknown |
XXX_SCEN_AB008961-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP530
| unknown, unknown, unknown |
XXX_SCEN_AB008962-1 |
133 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP496
| unknown, unknown, unknown |
XXX_SCEN_AB008963-1 |
131 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP497
| unknown, unknown, unknown |
XXX_SCEN_AB008964-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP500
| unknown, unknown, unknown |
XXX_SCEN_AB008965-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP501
| unknown, unknown, unknown |
XXX_SCEN_AB008966-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP502
| unknown, unknown, unknown |
XXX_SCEN_AB008967-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP503
| unknown, unknown, unknown |
XXX_SCEN_AB008968-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP504
| unknown, unknown, unknown |
XXX_SCEN_AB008969-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP505
| unknown, unknown, unknown |
XXX_SCEN_AB008970-1 |
138 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP506
| unknown, unknown, unknown |
XXX_SCEN_AB008971-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP507
| unknown, unknown, unknown |
XXX_SCEN_AB008972-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP508
| unknown, unknown, unknown |
XXX_SCEN_AB008973-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP509
| unknown, unknown, unknown |
XXX_SCEN_AB008974-1 |
135 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP510
| unknown, unknown, unknown |
XXX_SCEN_AB008975-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP511
| unknown, unknown, unknown |
XXX_SCEN_AB008976-1 |
87 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP512
| unknown, unknown, unknown |
XXX_SCEN_AB008977-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP513
| unknown, unknown, unknown |
XXX_SCEN_AB008978-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP514
| unknown, unknown, unknown |
XXX_SCEN_AB008979-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP515
| unknown, unknown, unknown |
XXX_SCEN_AB008980-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP498
| unknown, unknown, unknown |
XXX_SCEN_AB008981-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP499
| unknown, unknown, unknown |
XXX_SCEN_AB008982-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP538
| unknown, unknown, unknown |
XXX_SCEN_AB008983-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP539
| unknown, unknown, unknown |
XXX_SCEN_AB008984-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP540
| unknown, unknown, unknown |
XXX_SCEN_AB008985-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP541
| unknown, unknown, unknown |
XXX_SCEN_AB008986-1 |
115 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP542
| unknown, unknown, unknown |
XXX_SCEN_AB008987-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP543
| unknown, unknown, unknown |
XXX_SCEN_AB008988-1 |
135 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP544
| unknown, unknown, unknown |
XXX_SCEN_AB008989-1 |
141 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP545
| unknown, unknown, unknown |
XXX_SCEN_AB008990-1 |
135 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP546
| unknown, unknown, unknown |
XXX_SCEN_AB008991-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP547
| unknown, unknown, unknown |
XXX_SCEN_AB008992-1 |
136 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP548
| unknown, unknown, unknown |
XXX_SCEN_AB008993-1 |
102 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP549
| unknown, unknown, unknown |
XXX_SCEN_AB008994-1 |
127 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
| TREP550
| unknown, unknown, unknown |
XXX_SCEN_AB008995-1 |
137 |
tandem repeat, centromeric repeat, 1 unit |
Saccharum officinarum |
Hisashi Tsujimoto |
|