| GrainGenes Mapathon | ||||||||
| These maps were selected to add to the collection of GrainGenes interactive maps. | ||||||||
| For more information, contact the GrainGenes Curators at | curator@pw.usda.gov | |||||||
| Updated 4.15.03 | ||||||||
| Wheat | ||||||||
| GG Link | GG status | Maps | Title (Year) | Contact | ||||
| AFLP | MGG-263-635 | 2 Point Data | 5AL | Direct isolation of differentially expressed genes from a specific chromosome region of common wheat: application of the amplified fragment length polymorphism-based mRNA fingerprinting (AMF) method in combination with a deletion line of wheat (2000) | Y. Ogihara | |||
| PBR-119-393 | Online | 1A-7B | Integration of AFLP markers into an RFLP-based map of durum wheat (2000) | R. Tuberosa | ||||
| TAG-101-767 | 7B,D | Mapping and validation of chromosome regions conferring boron toxicity tolerance in wheat (Triticum aestivum) (2000) | S.P Jefferies | |||||
| PBR-119-87 | T1BL-1RS | Mapping of powdery mildew and leaf rust resistance genes on the wheat-rye translocated chromosome T1BL center dot 1RS using molecular and biochemical markers 2000) | F. J. Zeller | |||||
| RFLP | GEN-155-361 | In Progress | 1DS | Highly recombinogenic regions at seed storage protein loci on chromosome IDS of Aegilops tauschii, the D- genome donor of wheat (2000) | Evans Lagudah | |||
| TAG-100-519 | In Progress | 6A,B,D | Extended physical maps and a consensus physical map of the homoeologous group-6 chromosomes of wheat (Triticum aestivum L-em Thell.) (2000) | G.E. Hart | ||||
| TAG-100-602 | Online | 5AL | The Q locus of Iranian and European spelt wheat (2000) | M.C. Luo | ||||
| TAG-101-1139 | 1DS | NBS-LRR sequence family is associated with leaf and stripe rust resistance on the end of homoeologous chromosome group 1S of wheat (2000) | Evans Lagudah | |||||
| GNM-43-191 | Online | 5A,B,D | Physical characterization of the homoeologous Group 5 chromosomes of wheat in terms of rice linkage blocks, and physical mapping of some important genes (2000) | J.W. Snape | ||||
| TAG-97-968 | In Progress | 5A | Comparative RFLP mapping of Triticum monococcum genes controlling vernalization requirement (1998) | J. Dubcovsky | ||||
| TAG-98-1163 | Online | 1A-7D | Genetic linkage map of a wheat x spelt cross (1999) | M. M. Messmer | ||||
| TAG-94-98 | RFLP mapping of resistance to chlorosis induction by Pyrenophora tritici-repentis in wheat. (1997) | J.A.Anderson | ||||||
| TAG-97-220 | 4DS,5BL,6AL,4-6H | Genetic studies of Triticeae dehydrins: assignment of seed proteins and a regulatory factor to map positions (1998) | T. J. Close | |||||
| TAG-99-16 | In Progress | 1-7D | A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat (1999) | B. S. Gill | ||||
| TAG-98-1132 | Online | 1A-7D | Mapping of RFLP probes characterized for their polymorphism on wheat (1999) | J. M. Jacquemin | ||||
| TAG-102-177 | Online | 1A - 7B | Molecular linkage map for an intraspecific recombinant inred population of durum wheat (Triticum turgidum L. var. durum) (2001) | M.M. Nachit | ||||
| TAG-103-518 | Online | 1S - 7S | Comparative genetic analysis of the Aegilops longissima and Ae. Sharonensis genomes with common wheat | K.Devos | ||||
| TAG-102-504 | Online | 2-point data | Microsatellite markers linked to six Russian wheat aphid resistance genes in wheat | |||||
| SSR | GNM-43-689 | Online | 1D-7D | Isolation and mapping of microsatellite markers specific for the D genome of bread wheat (2000) | E. Pestova | |||
| TAG-100-1095 | 2 Point Data | 3BS | The detection and molecular mapping of a major gene for non-specific adult-plant disease resistance against stripe rust (Puccinia striiformis) in wheat (2000) | A. Börner | ||||
| TAG-97-946 | Online | 1A-7D | Fifty new microsatellite loci for the wheat genetic map. (1998) | P. Stephenson | ||||
| TAG-100-686 | In Progress | 3A,B.D | Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum (2000) | E. Salina | ||||
| TAG-104-413 | Online | 1A-7D | Genetic mapping of 66 new microsatellite (SSR) loci in bread wheat | P.K. Gupta | ||||
| QTL | CRS-39-1728 | Online | 3A | Molecular mapping of loci for agronomic traits on chromosome 3A of bread wheat. (1999) | P. S. Baenziger | |||
| CRS-39-805 | In Progress | 2AL, 3B | RFLP mapping of QTL for fusarium head blight resistance in wheat.(1999) | J. A. Anderson | ||||
| GNM-43-487 | 2B,5A,5D,7B,7D | Detection of QTLs for heading time and photoperiod response in wheat using a doubled-haploid population (2000) | Michel Bernard | |||||
| MBR-5-561 | In Progress | 3A | Mapping loci associated with milling yield in wheat (Triticum aestivum L.) (1999) | K.J. Chalmers | ||||
| MBR-6-247 | In Progress | 1A,2A,B,D,4A,5A | Location of genes involved in ear compactness in wheat (Triticum aestivum) by means of molecular markers (2000) | Michel Bernard | ||||
| TAG-100-1167 | 1A,B,3B,5D,6A,D | QTL analysis of bread-making quality in wheat using a doubled haploid population (2000) | G. Charmet | |||||
| TAG-100-419 | 1A-7D | Genetic analysis of durable leaf rust Genetic analysis of durable leaf rust (2000) | B. Keller | |||||
| CRS-39-1184 | 1A,2B,D,3B,7A,B | Quantitative trait loci associated with kernel traits in a soft x hard wheat cross. (1999) | Kim Campbell | |||||
| TAG-97-238 | 7A, | Mapping loci associated with flour colour in wheat (Triticum aestivum L.) (1998) | G. D. Parker | |||||
| TAG-98-1171 | 1A-7D | Quantitative trait loci for lodging resistance in a segregating wheat×spelt population (1998) | M. M. Messmer | |||||
| Other | PNA-97-13436 | 1AS | Subgenome chromosome walking in wheat: A 450-kb physical contig in Triticum monococcum L. spans the Lr10 resistance locus in hexaploid wheat (Triticum aestivum L.) ( 2000) | B. Keller | ||||
| TAG-99-199 | 5AL | Physical mapping of the Vrn-A1 and Fr1 genes on chromosome 5A of wheat using deletion lines (1998) | J.W. Snape | |||||
| GNM-45-706 | Online | 5AL | Genomic targeting and high-resolution mapping of the domestication gene Q in wheat | J. Faris | ||||
| MGG-244-253 | Online | 5AL | High-resolution cytological mapping of the long arm of chromosome 5A in common wheat using a series of deletion lines induced by gametocidal (GC) genes of Aegilops speltoides | Y. Ogihara | ||||
| Barley | ||||||||
| GG link | GG status | Maps | Title | Contact | ||||
| AFLP | TAG-103-415 | 1H-7H | Molecular mapping of the Oregon Wolfe Barleys: | J.M. Costa | ||||
| a phenotypically polymorphic doubled-haploid population | ||||||||
| GEN-153-1929 | 1H | The Mla (Powdery Mildew) Resistance Cluster Is Associated With Three NBS-LRR Gene Families and Suppressed Recombination Within a 240-kb DNA Interval on Chromosome 5S (1HS) of Barley | Roger Wise | |||||
| GNM-44-284 | Online | 1H-7H | Construction of a genetic map of barley (Hordeum vulgare L.) cross "Azumamugi' x "Kanto Nakate Gold' using a simple and efficient amplified fragment-length polymorphosm system | Y. Mano | ||||
| RFLP | GNM-42-412 | In Progress | 1-7H | Genetic and molecular characterization of barley chromosome telomeres. (1999) | A. Kleinhofs | |||
| TAG-103-869 | Online | 1-7H | An RFLP map of diploid Hordeum bulbosum L. and comparison with maps of barley ( H. vulgareL.) and wheat ( Triticum aestivumL.) | J.D.Snape | ||||
| TAG-98-521 | linkage groups | Chromosome landing at the Mla locus in barley (Hordeum vulgare L.) by means of high-resolution mapping with AFLP markers (1999) | A. Jahoor | |||||
| BGN-30-15 | In Progress | 1H-7H | Update of the Igri/Franka molecular marker map (2000) | D. Perovic | ||||
| BGN-30-16 | Online | 1H-7H | Construction of a barley RFLP linkage map using an F2 population erived from a cross between Ko A and Mokusekko 3 (2000) | T. Konishi | ||||
| BGN-25-18 | Online | 1H-7H | The Oregon Wolfe Barley population: A resource of barley genetics research and Instruction (Hayes, 2000) | P.M. Hayes | ||||
| SSR | GEN-156-1997 | Online | 1H-7H | A simple sequence repeat-based linkage map of barley (2000) | Robbie Waugh | |||
| TAG-101-652 | Online | 1H-7H | Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivars (2000) | K. Pillen | ||||
| QTL | TAG-100-881 | In Progress | 1H-7H | Localising QTLs for leaf rust resistance and agronomic traits in barley (Hordeum vulgare L.) (2000) | A. Jahoor | |||
| TAG-101-173 | Online | 1H-7H | QTL analysis of malting quality in barley based on the doubled-haploid progeny of two elite North American varieties representing different germplasm groups (2000) | P.M. Hayes | ||||
| TAG-101-580 | 1H-7H | Mapping quantitative and qualitative disease resistance genes in a doubled haploid population of barley (Hordeum vulgare) (2000) | P.M. Hayes | |||||
| TAG-99-1221 | In Progress | 1H-7H | Does function follow form? Principal QTLs for Fusarium head blight (FHB) resistance are coincident with QTLs for inflorescence traits and plant height in a doubled-haploid population of barley (1999) | P.M. Hayes | ||||
| web link | 1H-7H | Shiry x Galena Mapping Population | P.M. Hayes | |||||
| TAG-96-1205 | In Progress | 1H-7H | Identification of QTLs for partial resistance to leaf rust (Puccinia hordei) in barley. (1998) | Xiaoquan Qi | ||||
| BGN-30-32 | 3H,5H,7H | QTL analysis for interspecific crossability between Hordeum bulbosum and H. vulgare ( 2000) | H. Salvo | |||||
| PHY-70-1079 | In Progress | 1H-7H | Mapping of quantitative trait loci for Fusarium head blight resistance in barley | N.Lapiton | ||||
| Rye | ||||||||
| GG link | GG status | Maps | Title | Contact | ||||
| AFLP | ||||||||
| RFLP | TAG-97-1279 | 1R-7R | A consensus linkage map of rye (Secale cereale L.) including 374 RFLPs, 24 isozymes and 15 gene loci. (1998) | A. Börner | ||||
| TAG-102-517 | Online | 1R-7R | Molecular linkage mapping in rye (Secale cereale L.) (2001) | J.P.Gustafson | ||||
| TAG-102-709 | Online | 1R-7R | A genetic map of rye ( Secale cereale L.) combining RFLP, isozyme, protein, microsatellite and gene loci | A. Börner | ||||
| TAG-103-70 | In Progress | 4R, 6R, 7R | Linkage mapping of mutant loci in rye (Secale cereale L.) (2001) | A. Börner | ||||
| RAPD | TAG-102-1273 | Online | 1R-7R | Extending a RFLP-based genetic map of rye using random amplified polymorphic DNA (RAPD) and isozyme markers | Masojc, P | |||
| Oat | ||||||||
| GG link | GG status | Maps | Title | Contact | ||||
| AFLP | GNM-43-736 | Online | Linkage A-G | An anchored AFLP- and retrotransposon-based map of diploid Avena (2000) | R.P. Wise | |||
| GNM-43-94 | Online - KxO/AFLP | 30? Linkage grps | Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations (2000) | L.L. Domier | ||||
| GNM-43-94 | Online - CxI | 30? Linkage grps | Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations (2000) | L.L. Domier | ||||
| TAG-102-876 | 1 - 37 | Comparative AFLP mapping in two hexaploid oat populations | R.L.Phillips | |||||
| GNM-46-28 | Online | 29 Linkage Groups | A molecular marker map in 'Kanota' x 'Ogle' hexaploid oat (Avena sp.) enhanced by additional markers and a robust framework | C.Wight | ||||
| RFLP | GNM-44-192 | In Progress | A restriction fragment length polymorphism based linkage map of a diploid Avena recombinant inbred line population | Holland | ||||
| GNM-44-249 | Online | A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps | Holland | |||||