CATALOGUE OF GENE SYMBOLS FOR WHEAT:  2000 Supplement

 

R.A. McIntosh1, K.M. Devos2, J. Dubcovsky3 and W.J. Rogers4

 

1Plant Breeding Institute, The University of Sydney, 107 Cobbitty Road, Cobbitty, N.S.W., Australia, 2570.

 

2John Innes Centre, Norwich Research Park, Colney, Norwich, Norfolk, NR4 7UH, U.K.

 

3Department of Agronomy and Range Science, University of California, Davis, 95616 CA, U.S.A.

 

4Catedra de Genetica y Fitotecnia, Universidad Nacional del Centro de la Provincia de Buenos Aires, 7300 Azul, Argentina.

 

             The most recent edition of the Catalogue appeared in the Proceedings of the 9th International Wheat Genetics Symposium Vol. 5 (A.E. Slinkard ed., University Extension Press, University of Saskatchewan, Saskatoon, Canada).  A modified version is displayed on the Graingenes Website: grains@greengenes.cit.cornell.edu

The 1999 Supplement is included in 1999 Annual Wheat Newsletter, Wheat Information Service and is listed in the Graingenes Website.  The present Supplement will be offered to editors/curators for similar listing.

 

Revisions

 

10. Laboratory Designators for DNA markers

cdc

Gusta, L.V.

Crop Development Centre*

University of Saskatchewan

51 Campus Drive

Saskatoon, Saskatchewan, S7N 5A8

Canada

ocs

Kato, K.

Dept. of Crop Science*

Obihiro* University of Agriculture and Veterinary Medicine

Obihiro 080-8555

Japan

csl

Lagudah, E.S.*

Division of Plant Industry

CSIRO*, GPO Box 1600

Canberra ACT 2601

Australia

pgh

Shimosaka, E.

Laboratory of Plant Genecology*

Hokkaido* National Agricultural Experiment Station

1, Hitsujigaoka, Toyohira-ku

Sapporo, 062-8555

Japan

kvl

Collinge, D.B.

Section for Plant Pathology

Dept. of Plant Biology

Royal Veterinary and Agricultural University*

Thorvaldsenvej 40

1871 Frederiksberg C

Denmark

rgs

(Rice etiolated shoot* clones)

Sasaki, T. (see rgc)

msu

Talbert, L.E.

Plant Sciences Department

Montana State University

Bozeman, MT 59717

USA

sun

Sharp, PJ.

Plant Breeding Institute

University of Sydney*

PMB 11, Camden NSW 2570

Australia

 

 

 

 

 

 

 

Morphological, Physiological, Molecular and DNA Traits

 

Following the first paragraph insert:  More than 20 NILs involving genes affecting a range of traits are described in {0066}.  These are not yet incorporated into the Catalogue.

 

Gross Morphology : Spike Characteristics

3.      Sphaerococcum

Revision:

The naturally-occurring sphaerococcum gene in chromosome 3D and various mutant alleles conferring a similar phenotype form a homoeologous series. The sphaerococcoid alleles are either recessive or incompletely dominant. All three mapped loci are closely linked to the respective centromeres {0030}. The "a" alleles are allocated to Chinese Spring or "normal" wheats.

 

S-A1 {0029}.

3A {0056}.

v:

CS {0029}.

S-A1a {0029}.

 

v:

CS {0029}; common wheats {0029}.

S-A1b {0029}.

S3 {0056}.

v:

MS 1453 {0056}.

 

ma:

Xgwm2-3A(S) - 5.1 cM - S-A1 - 6.6 cM - Xgwm720-3A(L) {0030}.

S-B1 {0029}.

3B {0030}.

v:

CS {0029}.

S-B1a {0029}.

 

v:

CS {0029}; common wheats {0029}.

S-B1b {0029}.

S2 {0030}.

v:

MSK 2452 {0056}; MSK 2454 {0056}.

 

ma:

Xgwm685-3B(S) - 4.2 cM - S-B1 - 0.5 cM - Xgwm566/Xgwm845/cent {0030}.

S-D1 {0029}.

3D {1292,0030}; 3DS {1193,1194}; 3DL {692}.

v:

CS {0029}.

S-D1a {0029}.

 

v:

CS {0029}; common wheats {0029}.

S-D1b {0029}.

s1 [sp1 {1286}].

i:

S-615*11/T.sphaerococcum var. rotundatum {1500}.

 

 

s:

CS*7/T.sphaerococcum rubiginosum 3D {1304}.

 

 

v:

Sphaerococcum wheats {0029}.

S-D1c {0029}.

S1 {0056}.

v:

MS 3287 {0056}.

 

 

 

ma:

Xgdm72-3D(S) - 8.0 cM - S-D1 - 2.9 cM - Xgwm456-3D/cent {0030}.

 

Temporary  designation

s2 [sp2 {1286}].

Partially dominant {1286}.

Sphaerococcum simulator {1286}.

Sphaerococcum-like tetraploid wheats were reported  {122,475,1282,1286}, but comparisons between them, or with s2, were not made. Whereas Schmidt & Johnson {1281} reported a single recessive factor controlling the sphaerococcum character in tetraploid wheat, Joppa {621} using the same stock found that two recessive genes were necessary to produce this phenotype.

 

Ear length (new section under 'Spike characteristics')

QEl.ocs-5A.1 {0068}.

5AL {0068}.

v:

CS(T. spelta 5A)/CS(Cappelle-Desprez 5A) RI mapping population {0079}.

 

ma:

Associated with Xbcd9 {0068}.

 

 

Awnedness

1.       Dominant Inhibitors

1.1    Hooded

Hd. Add: ‘ma: Xcdo1387-4A – 8.2 cM – Hd – 7.2 cM – Xpsr163 {0047}.’

 

Boron Tolerance

Bo3.

4A {0012}.

 

Crossability with Rye, Hordeum and Aegilops spp.

1.   Common wheat

            Current section

2.   Tetraploid wheat

The Chinese tetraploid, Ailanmai, possesses recessive crossability genes on chromosomes 1A, 6A and 7A with the 6A gene being the least effective {0017}.

 

DNA Markers

Group 1S

Amendments:

Xcdo534-1B. Revise the last column to '(6A,B,D, 7A).'.

Xglk558-1D. Add ‘(5D).’ in the last column.

Xpsr549-1A.2. Add ‘(5A).’ in the last column.

Xpsr908-1B.  Add '(6D).' in the last column.

Xpsr1327-1D. Revise the first column to ‘Xpsr1327-1A [{0031}], 1D {410}.’, add ‘[Xpsr1327b-1A {0031}].’ in the second column and ‘(3B).’ in the last column.

Xsfr1(Lrk10)-1A. Revise the first column to 'Xsfr2(Lrk10)-1A.', and add '(3B,D).' in the last column.

Xsfrp1(Lrk10)-1A. Revise the first column to 'Xsfrp2(Lrk10)-1A.'.

 

Add:

Xcnl5-1A [{0059}].

 

AG10F/AG10R.

 

Xglk301-1B [{0031}].

[Xglk301a-1B {0031}].

pTag301.

(2D, 3D, 5D, 7A,B).

Xglk317-1B [{0031}].

[Xglk317a-1B {0031}].

pTag317.

(3D, 4D, 5A, 6A).

Xgwm264-1B.1 [{9929}1,{0003}2].

[Xgwm264-1B {9929}, Xgwm264c-1B {0003}].

WMS F264/ WMS R264.

(1B, 3B).

Xgwm498-1A {0035}2.

 

WMS F498/WMS R498.

(1BL).

Xgwm656-1A {0035}2.

 

WMS F656/WMS R656.

 

Xkvl901(Chs)-1B,D [{0091}].

[Chs-1B,D {0091}].

pBH72-O8 {0098}.

 

Xkvl902(Fmt)-1B,D [{0091].

[Fmt-1B,D {0091}].

pBH72-F1 {0099}.

 

Xpsr593-1B [{0031}].

[Xpsr593a-1B {0031}].

PSR593.

(2B, 4B, 7B).

Xpsr642-1B {0031}.

 

PSR642.

 

Xpsr960-1B [{0031}].

 

PSR960.

 

Xsfr3(LRR)-1A,B [{0031}].

[CD9a,b-1A {0031}].

CD9.

 

 

 

 

 

 

Group 1L

Amendments:

Xbcd265-1A,B,D. Add ‘(4A).’ in the last column.

Xglk163-1B,D. Add ‘(2D, 4D, 5AS, 5BL).’ in the last column.

Xglk558-1B. Add ‘(5D).’ in the last column.

Xgwm131-1B. Revise the first column to 'Xgwm131-1B.1 [{9929,0003}].', add '[Xgwm131-1B {9929}, Xgwm131a-1B {0003}].' in the second column, and add '(1B).' in the last column.

Xgwm498-1B. Add ‘(1AS).’ in the last column.

Xmwg710-1A,B,D. Add ‘(7BL).’ in the last column.

Xpsr172(Lhcb1)-1A. Add ‘(2B).’ in the last column.

Xpsr549-1A.1. Add ‘(5A).’ in the last column.

Xpsr1327-1A. Add ‘(1AS, 3B).’ in the last column.

 

Add:

Xkvl903(Chi2)-1B [{0091}].

[Cht22-1B {0091}].

pBH72-N12 {0092}.

 

Xgwm131-1B.2 [{0003}].

[Xgwm131b-1B {0003}].

WMS F131/WMS R131.

(1B, 3B).

Xgwm636-1B [{0003}].

[Xgwm636b-1B {0003}].

WMS F636/WMS R636.

(2A).

Xpsr924-1A,B,D {0043}.

 

PSR924.

(2B).

 

 

 

 

                               

Group 1

Amendments:

Xglk558-1D. Add ‘(5D).’ in the last column.

Xglk652-1D. Add ‘(3A).’ in the last column.

Xpsr386-1A. Add ‘(2A).’ in the last column.

Xwg232-1A. Add ‘(5B,D).’ in the last column.

 

Add:

Xgwm264-1B.2 [{0003}2].

[Xgwm264a-1B {0003}].

WMS F264/WMS R264

(1B, 3B).

Xpsr967-1A,B {598}.

 

PSR967.

(4B, 5A, 6AS, 6BL).

Xwpg501(Pdi)-1B {0064}.

 

pTAPDI501.

(4A,B,D).

 

 

 

 

 

Group 2S

Amendments:

Xbcd102-2D. Add '(6A).' in the last column.

Xcdo456-2A.1,A.2,D. Revise the first column to 'Xcdo456-2A.1,A.2 {1060}, 2B [{0074}], 2D {1060}.', add '[Xcdo456b-2B {0074}].' in the second column and add as a note 'The arm location of Xcdo456-2B was not reported in {0074}.'.

Xfbb40-2B. Revise the last column to '(6A,D).'.

Xgwm210-2D. Revise the first column to ‘Xgwm210-2B {9929}, 2D {1225}.’.

Xgwm264-2B. Delete.

Xgwm636-2A. Add '(1B).' in the last column.

Xpsr549-2B. Add ‘(5A).’ in the last column.

Xpsr566-2A,D. Revise the first column to ‘Xpsr566-2A {256}, 2B [{0031}], 2D {256}.’ and add ‘[Xpsr566b-2B {0031}].’ in the second column.

Xpsr593-2B. Add ‘(1B).’ in last column.

Xpsr908-2A,D. Add '(6D).' in the last column.

 

Add:

Xcsu182(Sod)-2B [{0091}].

[Sod-2B {0091}].

CSU182.

 

Xglk197-2A {0031}1, 2B {9926}4.

 

pTag197.

(7B).

Xglk222-2A {0031}, 2D {822}.

 

pTag222.

(5B,D).

The arm location of Xglk222-2D was not reported in {822}.

Xglk302-2B [{822,0049}].

[Xglk302b-2B {822,0049}].

pTag302.

(4A,D).

The arm location of Xglk302-2B was not reported in {822}.

Xglk398-2B.1,B.2 [{822,0049}].

[Xglk398a,b-2B {822,0049}].

pTag398.

 

The arm location of Xglk398-2B.1,B.2 was not reported in {822}.

Xglk400-2B {822,0049}.

 

pTag400.<