December 2020: 22 New Oat Genetic Map Sets

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Many new mapping sets for oat have been added to the GrainGenes collection of genetic maps. Many thanks to Charlene Wight at AAFC for precurating these map sets.

  • Oat-2020-Celx9210_Pc39 maps Pc39 among 65 SNP and DArT markers by Sowa and Paczos-Grzeda. Identification of molecular markers for the Pc39 gene conferring resistance to crown rust in oat. TAG 133:1081
  • Oat-2020-CORE-BG and Oat-2020-HxS-BG map beta-glucan content traits on the oat core collection and Hi-Fi x SolFi population from Fogarty et al., Identification of mixed linkage beta glucan quantitative trait loci and evaluation of AsCslF6 homoeologs in hexaploid oat. Crop Sci 60:914
  • Oat-2009-MxN-RGA and Oat-2009-SxW-RGA maps RGAs with STS and SCAR markers from Loarce et al.,Mapping of STS markers obtained from oat resistance gene analog sequences. Genome 52:608
  • Oat-2007-OxT-PcQTL maps 7 QTL for crown rust resistance on the Ogle x TAM O-301 population from Jackson et al., Characterization and Mapping of Oat Crown Rust Resistance Genes Using Three Assessment Methods. Phytopath. 97:1063
  • Oat-2006-KxO-RGA maps RGAs for crown rust resistance in Kanota x Ogle from Irigoyen et al., Identification of resistance gene analogs as markers of disease resistance loci in oats, using near-isogenic lines. Pl. Breed. 125:347
  • Oat-2004-KxO-RGA and Oat-2004-SxW-RGA mapped RGAs using degenerate primers from Irigoyen et al., Isolation and mapping of resistance gene analogs from the Avena strigosa genome. TAG 109:713
  • Oat-2003-OglexMAM17-5 maps 510 RFLP, AFLP, and SSRs on 28 linkage groups from Groh et al., A genetic linkage map for hexaploid, cultivated oat (Avena sativa L.) based on an intraspecific cross 'Ogle/MAM17-5'. TAG 102:876
    • Oat-2003-OxM-QTL1 maps 14 QTL for adult crown rust resistance (Pc), heading date and plant height on the Ogle x MAM17-5 population from Zhu et al., Identification of quantitative trait loci for resistance to crown rust in oat line MAM17-5. Crop Sci 43:358
    • Oat-2003-OxM-QTL2 maps 6 QTL for seedling crown rust resistance (Pc) on the Ogle x MAM17-5 population from Zhu et al., Quantitative trait loci associated with seedling resistance to isolates of Puccinia coronata in oat. Phytopath. 93:860
    • Oat-2003-OxM-QTL3 maps 4 barley yellow dwarf (BYD) QTL on the Ogle x MAM17-5 population from Zhu et al., Molecular mapping of genomic regions underlying barley yellow dwarf tolerance in cultivated oat (Avena sativa L.). TAG 106:1300
    • Oat-2003-OxM-QTL4 maps 23 QTL for groat protein and groat oil from Zhu et al., Genetic analysis of quantitative trait loci for groat protein and oil content in oat. Crop Sci 44:254
  • Oat-2002-OxT-QTL maps 50 vernalization response QTL from Holland et al., Genomic regions controlling vernalization and photoperiod responses in oat. TAG 105:113
  • Oat-2002-KxO_Pal and Oat-2002-CxI_Pal map new PCR markers in oat from Pal et al., Development and characterization of microsatellite and RFLP-derived PCR markers in oat. Crop Sci 42:912
  • Oat-2001-KxO maps AFLP and RFLP markers on 15 linkage groups from Kanota x Ogle from Groh et al., Comparative AFLP mapping in two hexaploid oat populations. TAG 102:876
    • Oat-2001-KxO-QTL maps 15 milling quality QTL on the 2001 KxO maps, and Oat-2001-KxM-QTL maps 8 milling quality QTL on the 2001 KxM maps, both from Groh et al., Analysis of factors influencing milling yield and their association to other traits by QTL analysis in two hexaploid oat populations TAG-103:9
    • Oat-2001-KxM-QTL maps 8 milling quality QTL on the Kanota x Marion (Canada) population by Groh et al., Analysis of factors influencing milling yield and their association to other traits by QTL analysis in two hexaploid oat populations. TAG 103-9
  • Oat-1997-64Lines is the first association mapping data from Beer et al., Associations between molecular markers and quantitative traits in an oat germplasm pool: Can we infer linkages? J. Ag. Genomics 3:197
  • Oat-1997-KxO-QTL maps 80 vernalization response QTL on the Kanota x Ogle population from Holland et al., Analysis of factors influencing milling yield and their association to other traits by QTL analysis in two hexaploid oat populations. Crop Sci 37:1306

Stay tuned for more in 2021!