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Triticum aestivum Chinese Spring pseudomolecules now available for BLAST on the NSF-IOS-1238231 Project site

The National Science Foundation-funded NSF-IOS-1238231 project has released unmasked pseudomolecules (v1.0) of T. aestivum Chinese Spring (CS). They are available for BLAST searches at the project website ( http://aegilops.wheat.ucdavis.edu/ATGSP/). The BLAST input portal is at the DATA page link at this URL. (The download function is still under construction.) Successful searches will return alignments including coordinates of the target sequences on the pseudomolecules.

Aegilops tauschii reference genome sequence now available for BLAST on the NSF-IOS-1238231 Project site

Aegilops tauschii is the wild species that contributed the D genome to bread wheat and this National Science Foundation-funded project has released the reference sequence of its genome. Masked and unmasked pseudomolecules of Ae. tauschii acc. AL8/78 and a database of complete transposable elements annotated in the Ae. tauschii genome are available for BLAST and JBrowse searches at the project website (http://aegilops.wheat.ucdavis.edu/ATGSP/). The BLAST input portal is at the DATA page link at this website.

IWGSC Reference Sequence v1.0 Annotation NOW available at URGI

The International Wheat Genome Sequencing Consortium is pleased to announce that the first version of the reference sequence of the bread wheat variety Chinese Spring (IWGSC RefSeq v1.0) is now available with annotation of genes, non-coding RNAs and transposable elements at the IWGSC sequence repository hosted by URGI-INRA .

Wild Emmer Wheat genome assembly WEWSeq v.1.0 (genotype Zavitan) is available to BLAST here at GrainGenes

In collaboration with the International Wild Emmer Wheat Genome Sequencing Consortium, GrainGenes is providing BLAST service for the Wild Emmer Genome Assembly (Zavitan WEWSeq v.1.0).

For further information, please go to: https://wheat.pw.usda.gov/GG3/wildemmer
For our BLAST service, please go to: https://wheat.pw.usda.gov/blast/
To download Zavitan data: https://wheat.pw.usda.gov/GG3/node/909

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