USDA wheat SNP database, KS

Single Nucleotide Polymorphism (SNP) markers for high-throughput genotyping to advance genomic, genetic and breeding research in wheat.

9K iSelect Assay:
Cavanagh, C.R., Chao, S., Wang, S., Huang, B.E., Stephen, S., Kiani, S., Forrest, K., Saintenac, C., Brown-Guedira, G.L., Akhunova, A., See, D., Bai, G., Pumphrey, M., Tomar, L., Wong, D., Kong, S., Reynolds, M., da Silva, M.L., Bockelman, H., Talbert, L., et al. (2013). Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars. Proc. Natl. Acad. Sci. U. S. A. 110: 8057-62.

90K iSelect Assay:
The design of the wheat 90K iSelect genotyping assay, the development of clustering algorithms and consensus map are described in the following paper:
S. Wang, D. Wong, K. Forrest, A. Allen, S. Chao, E. Huang, M. Maccaferri, S. Salvi, S. Milner, L. Cattivelli, A. M. Mastrangelo, A. Whan, S. Stephen, G. Barker, R. Wieseke, J. Plieske, IWGSC, M. Lillemo, D. Mather, R. Appels, R. Dolferus, G. Brown-Guedira, A. Korol, A. R. Akhunova, C. Feuillet, J. Salse, M. Morgante, C. Pozniak, M. Luo, J. Dvorak, M. Morell, J. Dubcovsky, M. Ganal, R. Tuberosa, C. Lawley, I. Mikoulitch, C. Cavanagh, K. J. Edwards, M. Hayden, E. Akhunov (2014). Characterization of polyploid wheat genomic diversity using a high-density 90,000 SNP array. Plant Biotechnology Journal 2014 Mar 20. doi: 10.1111/pbi.12183.